Gene omics information

Query gene ID	rbaak34i24_s_at
Gene name
Organism	Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.38	49.5	rbaak34i24_s_at	rbaak34i24	-	-	3e-1	At5g59870	HTA6	S.X.	H.G.	Please select
0.55	72.0	Contig21838_at	Contig21838	-	-	9e-24	At1g12360	KEU (keule)	S.X.	H.G.	Please select
0.19	19.6	Contig9548_at	Contig9548	-	-	9e-7	At3g63270	unknown protein	S.X.	H.G.	Please select
0.12	10.4	Contig2589_at	Contig2589	-	-	1e-3	At5g13500	unknown protein	S.X.	H.G.	Please select
0.12	10.4	Contig16161_at	Contig16161	-	-	7e-12	At1g26160	metal-dependent phosphohydrolase HD domain-containing protein	S.X.	H.G.	Please select
0.11	9.4	Contig1386_s_at	Contig1386	-	-	3e+0	At4g23080	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
22.2	99.8	GSM238428	Embryo 16DAF; Seed development; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
21.2	99.7	GSM238414	Endosperm 8DAF; Seed development; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
13.0	99.4	GSM238430	Embryo 25DAF; Seed development; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
11.9	99.3	GSM238415	Endosperm 8DAF; Seed development; Rep 2	GSE9365	Expression data from barley maturing and germinating grains
10.5	99.2	GSM238429	Embryo 16DAF; Seed development; Rep 2	GSE9365	Expression data from barley maturing and germinating grains
9.0	98.9	GSM238431	Embryo 25DAF; Seed development; Rep 2	GSE9365	Expression data from barley maturing and germinating grains
8.2	98.7	GSM238436	Embryo 48 h; Seed germination; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
6.7	98.3	GSM238434	Embryo 24 h; Seed germination; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
5.8	97.8	GSM282032	Malting_day1_Morex_rep1	GSE11200	Expression data from malting barley seeds
5.8	97.8	GSM282039	Malting_day4_Morex_rep2	GSE11200	Expression data from malting barley seeds

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.01	2e-1	36	Contig6027_at	Contig6027	-	-	2e-5	At2g31890	RAP	C.G.	S.X.	Please select
0.02	2e-1	36	Contig13023_at	Contig13023	-	-	3e+0	At3g04710	ankyrin repeat family protein	C.G.	S.X.	Please select
0.02	2e+0	32	Contig6079_s_at	Contig6079	-	-	4e-2	At3g23620	brix domain-containing protein	C.G.	S.X.	Please select
0.02	2e+0	32	Contig4593_at	Contig4593	-	-	9e-10	At4g23650	CDPK6 (CALCIUM-DEPENDENT PROTEIN KINASE 6)	C.G.	S.X.	Please select
0.03	1e+1	30	HW07N02u_at	HW07N02u	-	-	2e+0	At5g01510	-	C.G.	S.X.	Please select
0.01	1e+1	30	Contig9243_at	Contig9243	-	-	2e-4	At4g27470	zinc finger (C3HC4-type RING finger) family protein	C.G.	S.X.	Please select
0.01	1e+1	30	Contig8104_at	Contig8104	-	-	1e-3	At3g26932	DRB3 (dsRNA-binding protein 3)	C.G.	S.X.	Please select
0.02	1e+1	30	Contig23394_at	Contig23394	-	-	2e-2	At5g46730	glycine-rich protein	C.G.	S.X.	Please select
0.01	1e+1	30	Contig6254_at	Contig6254	-	-	3e+0	At2g37950	zinc finger (C3HC4-type RING finger) family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	3e-1	36	Arabidopsis thaliana	At5g59870	836109	HTA6	Encodes HTA6, a histone H2A protein.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	5e-4	46	Glycine max	GmaAffx.25260.1.A1_at	AI960030	-	-	4e-13	At2g23890	5' nucleotidase family protein	C.G.	S.X.	Please select
0.20	1e-113	410	Oryza sativa	Os09g0424600	AK073882.1	-	HAD superfamily (subfamily IG) hydrolase,5'-Nucleotidase protein	1e+0	At3g18720	F-box family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.18	2e-9	63	Populus trichocarpa	PtpAffx.206546.1.S1_at	pmrna12987	hypothetical protein	-	1e-15	At2g23890	5' nucleotidase family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.49	8e-33	141	Triticum aestivum	Ta.3383.2.S1_x_at	BJ211012	-	-	1e+1	At5g43250	NF-YC13 (NUCLEAR FACTOR Y, SUBUNIT C13)	C.G.	S.X.	Please select
0.05	2e+0	32	Vitis vinifera	1620692_at	CF202341.1	-	-	3e-1	At5g65330	AGL78 (AGAMOUS-LIKE 78)	C.G.	S.X.	Please select
0.03	9e+0	30	Zea mays	Zm.4568.1.A1_at	AI734826	hypothetical protein LOC100191866	-	6e-2	At5g47220	ERF2 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 2)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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