Gene omics information

Query gene ID bags16h04_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.1bags16h04_atbags16h04--9e-5At3g05400sugar transporter, putativeS.X.H.G.
0.075.8Contig10431_atContig10431--1e+0At3g11530vacuolar protein sorting 55 family protein / VPS55 family proteinS.X.H.G.
0.075.8Contig7021_atContig7021--7e-1At3g05425unknown proteinS.X.H.G.
0.064.8rbaak34i24_s_atrbaak34i24--3e-1At5g59870HTA6S.X.H.G.
0.043.4Contig1580_x_atContig1580precursor thionin-3e-1At1g28490SYP61 (SYNTAXIN OF PLANTS 61)S.X.H.G.
0.011.1Contig7030_atContig7030--9e-1At1g15740leucine-rich repeat family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
24.399.8GSM238415Endosperm 8DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
24.099.8GSM238409Pericarp 4DAF; seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
17.699.6GSM238408Pericarp 4DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
17.399.6GSM238414Endosperm 8DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
13.799.5GSM238435Embryo 24 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grains
12.499.4GSM1608317% SWC rep1GSE6990Barley drought stress
9.799.0GSM1611487% SWC rep3GSE6990Barley drought stress
8.698.8GSM238418Endosperm 25DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
7.898.6GSM238434Embryo 24 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
7.098.4GSM238416Endosperm 16DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.077e-754Contig875_s_atContig875--2e-3At3g05150sugar transporter family proteinC.G.S.X.
0.077e-754Contig875_atContig875--2e-3At3g05150sugar transporter family proteinC.G.S.X.
0.041e-240HVSMEm0022L18r2_atHVSMEm0022L18r2--3e+0At4g35900FDC.G.S.X.
0.031e-240Contig20863_atContig20863--1e+0At2g15830unknown proteinC.G.S.X.
0.032e-136Contig19929_atContig19929--3e-1At1g24000Bet v I allergen family proteinC.G.S.X.
0.062e-136Contig19105_atContig19105--3e+0At5g66320zinc finger (GATA type) family proteinC.G.S.X.
0.036e-134HVSMEn0010J22r2_atHVSMEn0010J22r2--9e-1At3g0920060S acidic ribosomal protein P0 (RPP0B)C.G.S.X.
0.026e-134Contig1308_atContig1308--3e-17At3g16240DELTA-TIPC.G.S.X.
0.016e-134Contig7293_atContig7293--1e+1At5g37780CAM1 (CALMODULIN 1)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.049e-548Arabidopsis thalianaAt3g05400819704sugar transporter, putativeF:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:transport, transmembrane transport;C:integral to membrane, membrane;BMFPOA---C.G.S.X.
0.055e-1375Glycine maxGmaAffx.79701.1.S1_atAW349693--2e-25At1g75220integral membrane protein, putativeC.G.S.X.
0.362e-118426Oryza sativaOs05g0579000AK068594.1-Integral membrane protein1e-3At2g48020sugar transporter, putativeC.G.S.X.
0.128e-1271Populus trichocarpaPtpAffx.17771.1.A1_atCV273533hypothetical protein-4e-13At1g75220integral membrane protein, putativeC.G.S.X.
0.600958Triticum aestivumTa.30759.1.S1_x_atCD911744--1e-2At1g19450integral membrane protein, putative / sugar transporter family proteinC.G.S.X.
0.043e-238Vitis vinifera1613638_atCF209803hypothetical protein LOC100266019-4e-11At1g75220integral membrane protein, putativeC.G.S.X.
0.394e-45180Zea maysZm.3277.1.A1_atCO520691hypothetical protein LOC100193700-2e-8At1g75220integral membrane protein, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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