Gene omics information

Query gene ID	baal1j07_at
Gene name
Organism	Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.1	baal1j07_at	baal1j07	-	-	5e-15	At4g30800	40S ribosomal protein S11 (RPS11B)	S.X.	H.G.	Please select
0.67	84.7	Contig23039_at	Contig23039	-	-	4e-2	At2g45920	U-box domain-containing protein	S.X.	H.G.	Please select
0.61	78.7	HVSMEm0018O23r2_at	HVSMEm0018O23r2	-	-	1e-3	At4g23150	protein kinase family protein	S.X.	H.G.	Please select
0.55	72.0	HT06M11u_at	HT06M11u	-	-	1e+1	Atcg01310	-	S.X.	H.G.	Please select
0.53	69.7	HY06F24u_x_at	HY06F24u	-	-	1e+1	At5g05710	pleckstrin homology (PH) domain-containing protein	S.X.	H.G.	Please select
0.35	45.1	EBem04_SQ003_H15_at	EBem04_SQ003_H15	-	-	3e+0	At5g33806	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
6.5	98.2	GSM261022	ABA-Control-rep2	GSE10328	ABA experiment
6.4	98.1	GSM261033	Dicktoo-chilling-rep1	GSE10329	Low temperature stress in cv. Dicktoo
5.6	97.7	GSM261040	Dicktoo-deacclimation-rep2	GSE10329	Low temperature stress in cv. Dicktoo
5.2	97.4	GSM261036	Dicktoo-subzero-rep1	GSE10329	Low temperature stress in cv. Dicktoo
5.1	97.3	GSM68904	27 h salt stressed replicate 1	GSE3097	Barley1 salinity stress study
5.1	97.3	GSM161221	cold treatment rep3	GSE6993	Barley low temperature stress
5.0	97.2	GSM261027	ABA-Late-rep1	GSE10328	ABA experiment
4.8	97.0	GSM261025	ABA-Early-rep2	GSE10328	ABA experiment
4.7	96.9	GSM68890	3 h control replicate 2	GSE3097	Barley1 salinity stress study
4.3	96.4	GSM160823	19% SWC rep1	GSE6990	Barley drought stress

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.13	5e-7	54	EBro08_SQ003_C13_at	EBro08_SQ003_C13	-	-	7e-5	At5g23740	RPS11-BETA (RIBOSOMAL PROTEIN S11-BETA)	C.G.	S.X.	Please select
0.09	3e-5	48	Contig14638_at	Contig14638	-	-	4e-35	At4g30800	40S ribosomal protein S11 (RPS11B)	C.G.	S.X.	Please select
0.03	1e-1	36	Contig15741_at	Contig15741	-	-	4e-1	At5g46300	unknown protein	C.G.	S.X.	Please select
0.04	1e-1	36	Contig24952_at	Contig24952	-	-	3e-1	At4g09450	myb family transcription factor	C.G.	S.X.	Please select
0.05	5e-1	34	EBes01_SQ003_E13_s_at	EBes01_SQ003_E13	-	-	8e-1	At4g30800	40S ribosomal protein S11 (RPS11B)	C.G.	S.X.	Please select
0.01	2e+0	32	Contig3756_at	Contig3756	-	-	4e-31	At3g12860	nucleolar protein Nop56, putative	C.G.	S.X.	Please select
0.01	2e+0	32	Contig3709_at	Contig3709	-	-	5e-5	At4g26620	sucrase-related	C.G.	S.X.	Please select
0.01	2e+0	32	Contig3341_at	Contig3341	-	-	3e+0	At1g32070	ATNSI (NUCLEAR SHUTTLE INTERACTING)	C.G.	S.X.	Please select
0.02	2e+0	32	Contig11099_at	Contig11099	-	-	3e-10	At2g18700	ATTPS11	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.16	5e-15	81	Arabidopsis thaliana	At4g30800	829203	40S ribosomal protein S11 (RPS11B)	F:structural constituent of ribosome;P:translation;C:cytosolic small ribosomal subunit;MOBAFP	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.29	6e-6	52	Glycine max	HgAffx.24246.1.S1_at	CA939192	-	-	8e-5	At4g30800	40S ribosomal protein S11 (RPS11B)	C.G.	S.X.	Please select
0.07	8e-3	42	Oryza sativa	Os04g0502300	AK120520.1	-	40S ribosomal protein S11	6e-59	At3g48930	EMB1080 (embryo defective 1080)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.13	9e-5	48	Populus trichocarpa	Ptp.6018.1.S1_at	CK104410	-	-	7e-2	At3g48930	EMB1080 (embryo defective 1080)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.10	3e-1	36	Triticum aestivum	TaAffx.66228.1.S1_at	CA620422	-	-	4e+0	At5g65730	xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative	C.G.	S.X.	Please select
0.09	1e-9	61	Vitis vinifera	1609509_at	CF206236.1	-	-	1e-50	At3g48930	EMB1080 (embryo defective 1080)	C.G.	S.X.	Please select
0.08	8e-9	59	Zea mays	Zm.2157.7.S1_at	CF019402	ribosomal protein S11	-	1e-38	At4g30800	40S ribosomal protein S11 (RPS11B)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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