Gene omics information

Query gene ID	baak1o23_s_at
Gene name
Organism	Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.1	baak1o23_s_at	baak1o23	-	-	1e+1	At4g18070	unknown protein	S.X.	H.G.	Please select
0.67	84.7	Contig15855_at	Contig15855	-	-	2e+0	At1g48325	Expressed protein	S.X.	H.G.	Please select
0.53	69.7	HO15C14S_s_at	HO15C14S	-	-	2e+0	At5g55210	unknown protein	S.X.	H.G.	Please select
0.50	66.9	Contig223_s_at	Contig223	-	-	8e-1	At5g56900	CwfJ-like family protein / zinc finger (CCCH-type) family protein	S.X.	H.G.	Please select
0.44	58.9	HVSMEh0085G19f_at	HVSMEh0085G19f	-	-	3e+0	At1g75510	transcription initiation factor IIF beta subunit (TFIIF-beta) family protein	S.X.	H.G.	Please select
0.31	38.6	Contig15714_at	Contig15714	-	-	2e-6	At2g48010	RKF3 (RECEPTOR-LIKE KINASE IN IN FLOWERS 3)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
11.5	99.3	GSM372984	genotype: 11542 - pathogen isolates: 5874 - time: 20 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
10.7	99.2	GSM372981	genotype: 11542 - pathogen isolates: 5874 - time: 16 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
10.5	99.2	GSM372987	genotype: 11542 - pathogen isolates: 5874 - time: 24 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
9.8	99.1	GSM431549	pathogen isolates: Polymyxa graminis - rep1	GSE17238	Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
9.6	99.0	GSM382234	Root_Hg3	GSE15295	Mercury toxicity in barley roots
9.4	99.0	GSM431546	pathogen isolates: Mock - rep1	GSE17238	Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
9.1	98.9	GSM372985	genotype: 11542 - pathogen isolates: 5874 - time: 20 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
8.8	98.9	GSM372990	genotype: 11542 - pathogen isolates: 5874 - time: 32 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
8.4	98.8	GSM372963	genotype: Mla6 - pathogen isolates: K1 - time: 16 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
7.7	98.6	GSM215729	gibberellin plus Yariv-reagent treatment rep1	GSE8712	The effects of Yariv-reagent on barley aleurone GA signaling

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	3e-2	38	Contig10961_at	Contig10961	-	-	2e-1	At1g78260	RNA recognition motif (RRM)-containing protein	C.G.	S.X.	Please select
0.04	3e-2	38	Contig2236_at	Contig2236	-	-	3e-2	At4g29350	PFN2 (PROFILIN 2)	C.G.	S.X.	Please select
0.01	2e+0	32	Contig9522_at	Contig9522	-	-	5e-15	At5g05630	amino acid permease family protein	C.G.	S.X.	Please select
0.03	2e+0	32	Contig10064_at	Contig10064	-	-	2e+0	At2g12465	LCR50 (Low-molecular-weight cysteine-rich 50)	C.G.	S.X.	Please select
0.03	2e+0	32	Contig15392_at	Contig15392	-	-	3e-1	At1g15640	unknown protein	C.G.	S.X.	Please select
0.02	2e+0	32	Contig7363_at	Contig7363	-	-	4e-2	At1g55480	binding / protein binding	C.G.	S.X.	Please select
0.03	2e+0	32	Contig4154_at	Contig4154	h-type thioredoxin	-	2e+0	At3g08710	ATH9 (thioredoxin H-type 9)	C.G.	S.X.	Please select
0.02	6e+0	30	Contig7992_at	Contig7992	-	-	1e-1	At3g63310	glutamate binding	C.G.	S.X.	Please select
0.01	6e+0	30	Contig7701_at	Contig7701	-	-	6e-15	At3g07050	GTP-binding family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	1e+1	30	Arabidopsis thaliana	At4g18070	827532	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFBPVA	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	1e+0	34	Glycine max	Gma.514.1.S1_at	BE191451	-	-	6e-2	At3g14225	GLIP4	C.G.	S.X.	Please select
0.08	3e-5	50	Oryza sativa	Os03g0123800	AK069496.1	-	Conserved hypothetical protein	6e-1	At2g22080	unknown protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.05	4e+0	32	Populus trichocarpa	PtpAffx.55747.1.A1_at	DN492739	-	-	2e+0	At3g53050	galactose-binding lectin family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.37	5e-39	161	Triticum aestivum	Ta.4674.1.S1_x_at	BJ269896	-	-	2e+0	At4g27140	2S seed storage protein 1 / 2S albumin storage protein / NWMU1-2S albumin 1	C.G.	S.X.	Please select
0.03	4e+0	30	Vitis vinifera	1612467_at	BQ799046	-	-	4e+0	At4g25690	unknown protein	C.G.	S.X.	Please select
0.13	4e-4	44	Zea mays	Zm.8764.1.A1_at	BM075531	hypothetical protein LOC100216915	-	6e+0	At3g29170	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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