Gene omics information

Query gene ID ZmAffx.995.1.S1_at
Gene name Sister of ramosa 3
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5369.1ZmAffx.995.1.S1_atAI855362Sister of ramosa 3-2e-6At1g22210trehalose-6-phosphate phosphatase, putativeS.X.H.G.
0.5065.7Zm.5337.1.A1_atBM079465--1e+0At5g11440CID5S.X.H.G.
0.3336.0Zm.9956.1.A1_atBM076038--1e+1At4g30993unknown proteinS.X.H.G.
0.2928.1Zm.8822.2.A1_atBM331999xylanase inhibitor protein 1-6e+0At5g56480protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinS.X.H.G.
0.2216.9Zm.4308.1.A1_atAY112093.1--1e-1At1g08390nucleic acid bindingS.X.H.G.
0.1710.6Zm.9822.1.A1_atBM348325--4e+0At2g44700kelch repeat-containing F-box family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
33.699.9GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
31.899.8GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
28.799.7GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
27.299.7GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
26.599.7GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
25.399.6GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
23.099.5GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
18.199.2GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
17.499.1GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.696.4GSM320460protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
1.007e-159557ZmAffx.995.1.A1_atAI855362sister of ramosa 3-2e-6At1g22210trehalose-6-phosphate phosphatase, putativeC.G.S.X.
0.113e-1993Zm.19253.1.S1_atCO526011ramosa3-1e-3At1g35910trehalose-6-phosphate phosphatase, putativeC.G.S.X.
0.026e-236Zm.13128.1.A1_atCA401861hypothetical protein LOC100273826-1e-8At1g43800acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putativeC.G.S.X.
0.032e-134Zm.9263.1.A1_atBM347538--2e+0At1g64405unknown proteinC.G.S.X.
0.022e-134Zm.7172.1.A1_atX74654.1beta3 tubulin-1e-76At5g62700TUB3C.G.S.X.
0.022e-134Zm.4887.1.S1_atAY108295.1hypothetical protein LOC100192109-6e-5At3g51860CAX3 (CATION EXCHANGER 3)C.G.S.X.
0.032e-134Zm.3797.1.S1_atBU097764pollen allergen Phl p 11-8e+0At5g48720XRI1 (X-RAY INDUCED TRANSCRIPT 1)C.G.S.X.
0.022e-134Zm.3257.1.S1_atL10635.1hypothetical protein LOC100216865 /// beta-4 tubulin-1e-67At5g62700TUB3C.G.S.X.
0.019e-132Zm.6415.1.A1_atCA404763--4e-3At2g45730eukaryotic initiation factor 3 gamma subunit family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.052e-652Arabidopsis thalianaAt1g22210838826trehalose-6-phosphate phosphatase, putativeF:catalytic activity, trehalose-phosphatase activity;P:trehalose biosynthetic process, metabolic process;C:cellular_component unknown;BPMOFA---C.G.S.X.
0.048e-134Glycine maxPsAffx.C321000005_atPsAffx.C321000005--5e+0At5g2354026S proteasome regulatory subunit, putativeC.G.S.X.
0.095e-959Hordeum vulgareContig21324_atContig21324--1e-4At5g65140trehalose-6-phosphate phosphatase, putativeC.G.S.X.
0.068e-1167Oryza sativaOs03g0386500AK106316.1-Trehalose-6-phosphate phosphatase3e-3At5g65140trehalose-6-phosphate phosphatase, putativeC.G.S.X.
0.051e-240Populus trichocarpaPtpAffx.205483.1.S1_atpmrna10844hypothetical protein-3e-11At1g22210trehalose-6-phosphate phosphatase, putativeC.G.S.X.
0.141e-1789Triticum aestivumTaAffx.112809.1.S1_atCA620727--2e-5At1g78090ATTPPB (TREHALOSE-6-PHOSPHATE PHOSPHATASE)C.G.S.X.
0.043e+030Vitis vinifera1616028_atCF403915--3e-4At3g19810unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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