Gene omics information

Query gene ID ZmAffx.992.1.A1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9699.8ZmAffx.992.1.A1_atAI855055--8e-1At2g02570nucleic acid bindingS.X.H.G.
0.3945.6Zm.6017.1.A1_atAI666208hypothetical protein LOC100274747 /// hypothetical protein LOC100277021-2e+0At4g08230glycine-rich proteinS.X.H.G.
0.3945.6Zm.12483.1.A1_atAI396412hypothetical protein LOC100273621-5e+0At5g25540CID6 (CTC-Interacting Domain 6)S.X.H.G.
0.3641.3Zm.6719.1.A1_atAI395930--8e-1At4g01960unknown proteinS.X.H.G.
0.3641.3ZmAffx.1074.1.A1_atAI947680--1e+1At2g42210mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family proteinS.X.H.G.
0.3437.2Zm.11596.1.A1_atBM379205--7e-2At2g46308unknown proteinS.X.H.G.
0.3336.0Zm.4926.1.A1_atAA979783propionyl-CoA carboxylase-2e-7At1g01770unknown proteinS.X.H.G.
0.3336.0ZmAffx.1046.1.A1_atAI881792--8e-1At1g79160unknown proteinS.X.H.G.
0.3233.4Zm.4166.1.A1_atBG841131hypothetical protein LOC100191831-1e+0At1g17145protein binding / zinc ion bindingS.X.H.G.
0.3131.6Zm.13740.1.A1_atAW330707--2e-16At2g29140APUM3 (Arabidopsis Pumilio 3)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
70.3100.0GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.798.9GSM320458protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.498.3GSM320456protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.396.9GSM258196B84xB73 11-day seedling aerial tissue biological replicate 3GSE10236Similar patterns of additive and non-additive gene expression in maize hybrids with varying levels of heterosis
5.396.9GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.096.7GSM320462protocol: Methylation filtration (MF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.996.7GSM320444protocol: mRNA - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.896.6GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.696.4GSM206290Upper pulvinus 15 min total RNA biorep 1GSE8320Transcriptional and translational gene regulation in the maize pulvinus
4.696.4GSM385708Deep-sowing 10d treatment IAA, biological rep2GSE15371Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowing
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
1.000807ZmAffx.992.1.S1_atAI855055--8e-1At2g02570nucleic acid bindingC.G.S.X.
0.041e+032Zm.3951.1.S1_atCO521489hypothetical protein LOC100279623-1e+0At3g26510octicosapeptide/Phox/Bem1p (PB1) domain-containing proteinC.G.S.X.
0.025e+030Zm.6793.1.S1_atCF014599hypothetical protein LOC100216900-9e+0At5g26890unknown proteinC.G.S.X.
0.015e+030Zm.5487.1.S1_atCA403445hypothetical protein LOC100274326-6e-2At1g31660-C.G.S.X.
0.025e+030Zm.3765.1.S1_s_atCD446889GADPH (AA 1-337)-1e-113At3g04120GAPC1 (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE C SUBUNIT 1)C.G.S.X.
0.015e+030Zm.274.1.A1_atU45857.1cytosolic glyceroldehyde-3-phosphate dehydrogenase GAPC4-7e-135At1g13440GAPC2 (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE C2)C.G.S.X.
0.025e+030Zm.2601.1.S1_atU45856.1cytosolic glyceroldehyde-3-phosphate dehydrogenase GAPC3 /// glyceraldehyde-3-phosphate dehydrogenase-3e-139At3g04120GAPC1 (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE C SUBUNIT 1)C.G.S.X.
0.015e+030Zm.1942.1.A1_atCF014864--7e-57At5g49460ACLB-2 (ATP CITRATE LYASE SUBUNIT B 2)C.G.S.X.
0.035e+030Zm.17262.1.S1_atCF244949hypothetical protein LOC100191241-2e-2At5g10750unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.038e-134Arabidopsis thalianaAt2g02570814787nucleic acid bindingF:nucleic acid binding;P:unknown;C:unknown;MFOPB---C.G.S.X.
0.042e-240Glycine maxPsAffx.psMA010xD11f_s_atPsAffx.psMA010xD11f--1e+0At2g30620histone H1.2C.G.S.X.
0.056e+030Hordeum vulgareHV10C01u_x_atHV10C01u--5e-8At5g05110cysteine protease inhibitor, putative / cystatin, putativeC.G.S.X.
0.026e+032Oryza sativaOs12g01895009640.m00815-Flavin-containing monooxygenase FMO family protein1e-5At1g21430YUC11C.G.S.X.
0.054e+032Populus trichocarpaPtpAffx.201297.1.S1_atpmrna2576hypothetical protein-4e-1At4g13220unknown proteinC.G.S.X.
0.043e+032Triticum aestivumTaAffx.128643.9.S1_atCA629224--1e+0At1g68500unknown proteinC.G.S.X.
0.044e+030Vitis vinifera1614390_atCB978875hypothetical protein LOC100249741-2e-1At4g34160CYCD3C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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