Gene omics information

Query gene ID ZmAffx.980.1.S1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8294.6ZmAffx.980.1.S1_atAI714647--3e+0At4g28485unknown proteinS.X.H.G.
0.3336.0ZmAffx.459.1.S1_atAI677212--8e-1At1g2691060S ribosomal protein L10 (RPL10B)S.X.H.G.
0.3233.4Zm.13162.1.A1_atCO521967--9e-3At3g02040SRG3 (senescence-related gene 3)S.X.H.G.
0.3131.6Zm.13658.1.A1_atAY107148.1hypothetical protein LOC100193262-1e+0At3g50350unknown proteinS.X.H.G.
0.2115.5Zm.9311.2.A1_x_atCB350735hypothetical protein LOC100274965-5e+0At3g17860JAZ3 (JASMONATE-ZIM-DOMAIN PROTEIN 3)S.X.H.G.
0.2014.2Zm.6557.1.S1_atCF635193--4e-34At1g10290ADL6 (DYNAMIN-LIKE PROTEIN 6)S.X.H.G.
0.104.6Zm.14798.1.S1_x_atCF627333--1e-4At3g01950unknown proteinS.X.H.G.
0.062.3Zm.3441.1.A1_atCN844939hypothetical protein LOC100193908-4e-1At4g33467unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
32.599.8GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
26.999.7GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
26.499.7GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
26.399.7GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
22.899.5GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
22.699.5GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
21.899.4GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
21.399.4GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
15.098.9GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.497.8GSM320457protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
1.000813ZmAffx.980.1.A1_atAI714647hypothetical protein LOC100277796-3e+0At4g28485unknown proteinC.G.S.X.
0.026e-340Zm.10096.1.A1_atBM379421adhesin FhaB-5e-2At1g12665-C.G.S.X.
0.039e-236Zm.9315.1.S1_atAW225214hypothetical protein LOC100274732-2e-5At4g39235unknown proteinC.G.S.X.
0.039e-236Zm.14129.1.A1_a_atAY104662.140S ribosomal protein S24-1e-22At3g0492040S ribosomal protein S24 (RPS24A)C.G.S.X.
0.029e-236Zm.11626.1.A1_a_atCA404483hypothetical protein LOC100272474-1e+1At5g49940NFU2 (NIFU-LIKE PROTEIN 2)C.G.S.X.
0.019e-236Zm.105.1.S1_atM24845.1globulin1-1e+0At5g06710HAT14 (HOMEOBOX FROM ARABIDOPSIS THALIANA)C.G.S.X.
0.033e-134Zm.3162.1.A1_atBM340731hypothetical protein LOC100279366-3e-8At4g33640unknown proteinC.G.S.X.
0.023e-134Zm.2735.1.A1_atAW067028hypothetical protein LOC100217013-5e-1At5g65080MAF5 (MADS AFFECTING FLOWERING 5)C.G.S.X.
0.023e-134Zm.17522.1.S1_atCK144399--8e-1At2g02180TOM3C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.043e+032Arabidopsis thalianaAt4g28485828966unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;P---C.G.S.X.
0.043e-136Glycine maxPsAffx.psZO003iC05r_s_atPsAffx.psZO003iC05r--3e-1At5g14440-C.G.S.X.
0.291e-53208Hordeum vulgareContig4895_atContig4895--2e-3At2g31410unknown proteinC.G.S.X.
0.343e-91335Oryza sativaOs02g0595400AK069935.1-Conserved hypothetical protein7e+0At2g31410unknown proteinC.G.S.X.
0.044e+032Populus trichocarpaPtpAffx.216478.1.S1_atpmrna31262--4e+0At4g26370antitermination NusB domain-containing proteinC.G.S.X.
0.303e-56218Triticum aestivumTa.9319.1.S1_atCA648794--5e-1At2g31410unknown proteinC.G.S.X.
0.049e-132Vitis vinifera1613068_atBQ793388hypothetical protein LOC100266457-1e+0At1g22590MADS-box family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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