Gene omics information

Query gene ID ZmAffx.928.1.A1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9199.0ZmAffx.928.1.A1_atAI795442--8e-1At5g24270SOS3 (SALT OVERLY SENSITIVE 3)S.X.H.G.
0.7389.9Zm.17669.1.S1_atCF636811--3e+0At1g79790haloacid dehalogenase-like hydrolase family proteinS.X.H.G.
0.7389.9ZmAffx.182.1.S1_atAI668332--3e+0At1g68250unknown proteinS.X.H.G.
0.6077.8ZmAffx.850.1.A1_atAI770642--2e-10At3g57880C2 domain-containing proteinS.X.H.G.
0.5369.1Zm.18449.1.A1_atCO528518--5e+0At4g03210XTH9 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 9)S.X.H.G.
0.5065.7Zm.5886.1.S1_atAF236371.1prohibitin4-3e-55At4g28510ATPHB1 (PROHIBITIN 1)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
29.499.8GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
29.099.8GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
26.599.7GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
19.499.3GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
18.799.2GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
16.099.0GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
15.298.9GSM320461protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.898.9GSM320456protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.098.8GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.398.8GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
1.000807ZmAffx.928.1.S1_atAI795442--8e-1At5g24270SOS3 (SALT OVERLY SENSITIVE 3)C.G.S.X.
0.021e+032Zm.14139.1.A1_atBG266248xylem cysteine proteinase 2-8e-4At1g20850XCP2 (xylem cysteine peptidase 2)C.G.S.X.
0.035e+030Zm.9088.1.A1_atCB350848--1e+0At2g06908unknown proteinC.G.S.X.
0.035e+030Zm.8193.1.A1_atBM338936--7e-15At1g34020transporter-relatedC.G.S.X.
0.025e+030Zm.5159.1.A1_atCA403363hypothetical protein LOC100191167-1e-2At4g28400protein phosphatase 2C, putative / PP2C, putativeC.G.S.X.
0.025e+030Zm.5018.2.S1_atAY112461.1Hypothetical protein LOC100194303-4e-1At5g49350unknown proteinC.G.S.X.
0.025e+030Zm.5018.2.A1_a_atAY112461.1hypothetical protein LOC100194303-4e-1At5g49350unknown proteinC.G.S.X.
0.025e+030Zm.3959.1.A1_atAY109274.1hypothetical protein LOC100193090-4e-21At1g34020transporter-relatedC.G.S.X.
0.035e+030Zm.3372.1.S1_atAY104348.1DNA-directed RNA polymerases I, II, and III 7.3 kDa polypeptide-2e-3At5g41010NRPB12C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.038e-134Arabidopsis thalianaAt5g24270832494SOS3 (SALT OVERLY SENSITIVE 3)encodes a calcium sensor that is essential for K+ nutrition, K+/Na+ selectivity, and salt tolerance. The protein is similar to calcineurin B. Lines carrying recessive mutations are hypersensitive to Na+ and Li+ stresses and is unable to grow in low K+. The growth defect is rescued by extracellular calcium.---C.G.S.X.
0.044e+032Glycine maxHgAffx.22272.1.S1_atBI396808--1e+1At5g28919-C.G.S.X.
0.042e+032Hordeum vulgareContig26495_atContig26495--6e-5At5g27430signal peptidase subunit family proteinC.G.S.X.
0.032e+034Oryza sativaOs04g0346800AK109486.1-Pyrophosphohydrolase MazG RS21-C6 family protein5e-1At1g04800glycine-rich proteinC.G.S.X.
0.041e+034Populus trichocarpaPtpAffx.222860.1.S1_s_atpmrna40550cytochrome P450 /// cytochrome P450 /// cytochrome P450 /// cytochrome P450 /// cytochrome P450 /// cytochrome P450 /// hypothetical protein-8e-4At3g15460brix domain-containing proteinC.G.S.X.
0.149e-1063Triticum aestivumTa.6997.3.A1_atBJ313571--4e+0At5g50510-C.G.S.X.
0.049e-132Vitis vinifera1619527_atCB970737--1e+0At5g50950fumarate hydratase, putative / fumarase, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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