CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID ZmAffx.877.1.S1_at

Gene name

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.85 95.9 ZmAffx.877.1.S1_at AI770795 - - 8e-1 At5g16240 acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putative S.X. H.G.
0.52 67.3 Zm.14759.1.S1_at CB280800 hypothetical protein LOC100191677 - 4e-2 At5g46640 DNA-binding family protein S.X. H.G.
0.48 61.3 Zm.18974.1.A1_at BQ539399 hypothetical protein LOC100272472 - 3e-1 At1g17147 - S.X. H.G.
0.47 59.9 Zm.13551.1.A1_at AY108205.1 - - 2e+0 At2g33870 ArRABA1h (Arabidopsis Rab GTPase homolog A1h) S.X. H.G.
0.44 55.7 Zm.5884.1.A1_at BM340350 hypothetical protein LOC100192097 - 8e-2 At2g35880 - S.X. H.G.
0.42 51.3 Zm.13345.2.A1_x_at CD435730 hypothetical protein LOC100279020 - 2e+0 At5g62360 invertase/pectin methylesterase inhibitor family protein S.X. H.G.
0.34 37.2 Zm.7054.1.S1_at BM331766 actin-depolymerizing factor 6 - 6e-4 At5g59890 ADF4 (ACTIN DEPOLYMERIZING FACTOR 4) S.X. H.G.
0.29 28.1 Zm.12300.1.A1_at CF626520 ruBisCO large subunit-binding protein subunit alpha - 1e-37 At2g28000 CPN60A (CHAPERONIN-60ALPHA) S.X. H.G.
0.27 24.6 Zm.6119.1.A1_at AY105312.1 - - 4e-3 At2g28380 DRB2 (DSRNA-BINDING PROTEIN 2) S.X. H.G.
0.21 15.5 ZmAffx.480.1.A1_at AI677621 transmembrane 9 superfamily protein member 4 - 8e-1 At1g18871 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
49.3 100.0 GSM320455 protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
38.3 99.9 GSM320451 protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
23.9 99.5 GSM320453 protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
23.3 99.5 GSM320450 protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
19.6 99.3 GSM320454 protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
19.3 99.3 GSM320449 protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
16.3 99.0 GSM320452 protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.8 98.8 GSM320447 protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.4 98.4 GSM320448 protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.1 96.8 GSM320464 protocol: Methylation filtration (MF) - genotype: CML69 maize inbred - rep3 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
1.00 0 807 ZmAffx.877.1.A1_at AI770795 - - 8e-1 At5g16240 acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putative C.G. S.X.
0.02 1e+0 32 Zm.7177.2.A1_a_at CF637816 aldolase1 /// hypothetical protein LOC100272913 /// fructose-bisphosphate aldolase cytoplasmic isozyme - 4e-18 At3g52930 fructose-bisphosphate aldolase, putative C.G. S.X.
0.02 1e+0 32 Zm.7177.2.A1_x_at CF637816 hypothetical protein LOC100272913 - 4e-18 At3g52930 fructose-bisphosphate aldolase, putative C.G. S.X.
0.03 1e+0 32 Zm.19311.1.A1_at CO526713 AT-hook protein 1 - 3e-1 At4g09270 unknown protein C.G. S.X.
0.03 1e+0 32 Zm.16836.1.A1_at CF629974 hypothetical protein LOC100193667 - 7e-2 At1g80400 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.02 5e+0 30 Zm.7177.1.A1_at M16220.1 aldolase1 - 2e-26 At3g52930 fructose-bisphosphate aldolase, putative C.G. S.X.
0.03 5e+0 30 Zm.6298.1.A1_at CD444675 hypothetical protein LOC100278812 - 6e+0 At5g67070 RALFL34 (ralf-like 34) C.G. S.X.
0.02 5e+0 30 Zm.6162.2.A1_at AI676924 hypothetical protein LOC100272661 - 4e-5 At1g62760 invertase/pectin methylesterase inhibitor family protein C.G. S.X.
0.02 5e+0 30 Zm.6162.2.S1_at AI676924 - - 4e-5 At1g62760 invertase/pectin methylesterase inhibitor family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 8e-1 34 Arabidopsis thaliana At5g16240 831484 acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putative F:acyl-[acyl-carrier-protein] desaturase activity, oxidoreductase activity, transition metal ion binding;P:fatty acid metabolic process, fatty acid biosynthetic process;C:unknown;PBOM - - - C.G. S.X.
0.06 4e+0 32 Glycine max GmaAffx.71621.2.S1_at CA820064 - - 5e-2 At4g20430 subtilase family protein C.G. S.X.
0.04 6e+0 30 Hordeum vulgare HV05G07u_at HV05G07u - - 2e-1 At3g59070 auxin-responsive protein, putative C.G. S.X.
0.20 1e-93 343 Oryza sativa Os01g0769200 AK070376.1 - Proteinase inhibitor I9, subtilisin propeptidedomain containing protein 8e-21 At4g20430 subtilase family protein C.G. S.X.
0.03 1e+0 34 Populus trichocarpa Ptp.4547.1.S1_at CV258827 magnesium transporter - 3e-1 At1g31130 unknown protein C.G. S.X.
0.03 3e+0 32 Triticum aestivum Ta.6020.2.S1_a_at BJ242162 - - 8e-14 At3g01790 ribosomal protein L13 family protein C.G. S.X.
0.04 4e+0 30 Vitis vinifera 1622049_at CF415732 hypothetical protein LOC100251557 - 2e-2 At5g22020 strictosidine synthase family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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