Gene omics information

Query gene ID ZmAffx.877.1.S1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8595.9ZmAffx.877.1.S1_atAI770795--8e-1At5g16240acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putativeS.X.H.G.
0.5267.3Zm.14759.1.S1_atCB280800hypothetical protein LOC100191677-4e-2At5g46640DNA-binding family proteinS.X.H.G.
0.4861.3Zm.18974.1.A1_atBQ539399hypothetical protein LOC100272472-3e-1At1g17147-S.X.H.G.
0.4759.9Zm.13551.1.A1_atAY108205.1--2e+0At2g33870ArRABA1h (Arabidopsis Rab GTPase homolog A1h)S.X.H.G.
0.4455.7Zm.5884.1.A1_atBM340350hypothetical protein LOC100192097-8e-2At2g35880-S.X.H.G.
0.4251.3Zm.13345.2.A1_x_atCD435730hypothetical protein LOC100279020-2e+0At5g62360invertase/pectin methylesterase inhibitor family proteinS.X.H.G.
0.3437.2Zm.7054.1.S1_atBM331766actin-depolymerizing factor 6-6e-4At5g59890ADF4 (ACTIN DEPOLYMERIZING FACTOR 4)S.X.H.G.
0.2928.1Zm.12300.1.A1_atCF626520ruBisCO large subunit-binding protein subunit alpha-1e-37At2g28000CPN60A (CHAPERONIN-60ALPHA)S.X.H.G.
0.2724.6Zm.6119.1.A1_atAY105312.1--4e-3At2g28380DRB2 (DSRNA-BINDING PROTEIN 2)S.X.H.G.
0.2115.5ZmAffx.480.1.A1_atAI677621transmembrane 9 superfamily protein member 4-8e-1At1g18871unknown proteinS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
49.3100.0GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
38.399.9GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
23.999.5GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
23.399.5GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
19.699.3GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
19.399.3GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
16.399.0GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.898.8GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.498.4GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.196.8GSM320464protocol: Methylation filtration (MF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
1.000807ZmAffx.877.1.A1_atAI770795--8e-1At5g16240acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putativeC.G.S.X.
0.021e+032Zm.7177.2.A1_a_atCF637816aldolase1 /// hypothetical protein LOC100272913 /// fructose-bisphosphate aldolase cytoplasmic isozyme-4e-18At3g52930fructose-bisphosphate aldolase, putativeC.G.S.X.
0.021e+032Zm.7177.2.A1_x_atCF637816hypothetical protein LOC100272913-4e-18At3g52930fructose-bisphosphate aldolase, putativeC.G.S.X.
0.031e+032Zm.19311.1.A1_atCO526713AT-hook protein 1-3e-1At4g09270unknown proteinC.G.S.X.
0.031e+032Zm.16836.1.A1_atCF629974hypothetical protein LOC100193667-7e-2At1g80400zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.025e+030Zm.7177.1.A1_atM16220.1aldolase1-2e-26At3g52930fructose-bisphosphate aldolase, putativeC.G.S.X.
0.035e+030Zm.6298.1.A1_atCD444675hypothetical protein LOC100278812-6e+0At5g67070RALFL34 (ralf-like 34)C.G.S.X.
0.025e+030Zm.6162.2.A1_atAI676924hypothetical protein LOC100272661-4e-5At1g62760invertase/pectin methylesterase inhibitor family proteinC.G.S.X.
0.025e+030Zm.6162.2.S1_atAI676924--4e-5At1g62760invertase/pectin methylesterase inhibitor family proteinC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.038e-134Arabidopsis thalianaAt5g16240831484acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putativeF:acyl-[acyl-carrier-protein] desaturase activity, oxidoreductase activity, transition metal ion binding;P:fatty acid metabolic process, fatty acid biosynthetic process;C:unknown;PBOM---C.G.S.X.
0.064e+032Glycine maxGmaAffx.71621.2.S1_atCA820064--5e-2At4g20430subtilase family proteinC.G.S.X.
0.046e+030Hordeum vulgareHV05G07u_atHV05G07u--2e-1At3g59070auxin-responsive protein, putativeC.G.S.X.
0.201e-93343Oryza sativaOs01g0769200AK070376.1-Proteinase inhibitor I9, subtilisin propeptidedomain containing protein8e-21At4g20430subtilase family proteinC.G.S.X.
0.031e+034Populus trichocarpaPtp.4547.1.S1_atCV258827magnesium transporter-3e-1At1g31130unknown proteinC.G.S.X.
0.033e+032Triticum aestivumTa.6020.2.S1_a_atBJ242162--8e-14At3g01790ribosomal protein L13 family proteinC.G.S.X.
0.044e+030Vitis vinifera1622049_atCF415732hypothetical protein LOC100251557-2e-2At5g22020strictosidine synthase family proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage