Gene omics information

Query gene ID	ZmAffx.871.1.S1_at
Gene name	hypothetical protein LOC100273239
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.44	55.7	ZmAffx.871.1.S1_at	AI770769	hypothetical protein LOC100273239	-	8e-1	At1g69760	unknown protein	S.X.	H.G.	Please select
0.43	52.8	Zm.280.1.A1_at	U58208.1	Binding protein homolog1	-	0	At5g42020	BIP2	S.X.	H.G.	Please select
0.36	41.3	Zm.14120.1.S1_at	AY105834.1	-	-	7e-30	At1g71220	EBS1 (EMS-mutagenized bri1 suppressor 1)	S.X.	H.G.	Please select
0.35	38.9	Zm.6929.1.A1_a_at	BG842822	CDPK substrate protein 1	-	3e-5	At5g29000	myb family transcription factor	S.X.	H.G.	Please select
0.33	36.0	Zm.18385.1.S1_at	CO530624	hypothetical protein LOC100276763	-	1e-1	At3g47810	MAG1 (MAIGO 1)	S.X.	H.G.	Please select
0.31	31.6	Zm.4471.5.A1_at	BF729171	protein kinase APK1B	-	2e-2	At3g47510	unknown protein	S.X.	H.G.	Please select
0.17	10.6	Zm.9900.1.A1_at	BM351046	-	-	2e-2	At5g28610	-	S.X.	H.G.	Please select
0.17	10.6	Zm.2611.1.A1_a_at	BM348249	hypothetical protein LOC100278318	-	3e-1	At1g49820	ATMTK (ARABIDOPSIS THALIANA S-METHYL-5-THIORIBOSE KINASE)	S.X.	H.G.	Please select
0.16	9.4	Zm.6726.2.A1_at	AY112394.1	-	-	1e-1	At5g16250	unknown protein	S.X.	H.G.	Please select
0.15	8.6	ZmAffx.900.1.S1_at	AI770893	-	-	1e+1	At5g19480	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
25.8	99.6	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
25.8	99.6	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
23.4	99.5	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
22.4	99.5	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
22.2	99.4	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
20.4	99.3	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
19.6	99.3	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
15.9	99.0	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.6	98.8	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.4	97.0	GSM320463	protocol: Methylation filtration (MF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.81	0	656	ZmAffx.871.1.A1_at	AI770769	-	-	8e-1	At1g69760	unknown protein	C.G.	S.X.	Please select
0.05	9e-5	46	Zm.2256.1.A1_at	BG841324	-	-	4e+0	At1g48350	ribosomal protein L18 family protein	C.G.	S.X.	Please select
0.04	5e-3	40	ZmAffx.1060.1.A1_at	AI881420	-	-	1e-9	At1g51570	C2 domain-containing protein	C.G.	S.X.	Please select
0.04	5e-3	40	ZmAffx.1060.1.S1_at	AI881420	phosphoribosylanthranilate transferase	-	1e-9	At1g51570	C2 domain-containing protein	C.G.	S.X.	Please select
0.04	5e-3	40	ZmAffx.1060.1.S1_s_at	AI881420	phosphoribosylanthranilate transferase	-	1e-9	At1g51570	C2 domain-containing protein	C.G.	S.X.	Please select
0.02	5e-3	40	Zm.1288.2.A1_at	CF634910	-	-	8e-29	At3g52880	monodehydroascorbate reductase, putative	C.G.	S.X.	Please select
0.05	2e-2	38	ZmAffx.805.1.A1_at	AI770378	-	-	2e-1	At4g14800	PBD2 (20S PROTEASOME BETA SUBUNIT 2)	C.G.	S.X.	Please select
0.05	2e-2	38	ZmAffx.805.1.S1_at	AI770378	hypothetical protein LOC100278503	-	2e-1	At4g14800	PBD2 (20S PROTEASOME BETA SUBUNIT 2)	C.G.	S.X.	Please select
0.05	2e-2	38	ZmAffx.1015.1.A1_at	AI881467	Protein kinase catalytic domain	-	2e-1	At2g19820	LBD9 (LOB DOMAIN-CONTAINING PROTEIN 9)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	8e-1	34	Arabidopsis thaliana	At1g69760	843312	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POFBM	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.07	2e-2	40	Glycine max	GmaAffx.83103.1.S1_at	BG653261	-	-	5e-9	At4g26130	unknown protein	C.G.	S.X.	Please select
0.05	2e-2	38	Hordeum vulgare	HVSMEg0015B10r2_at	HVSMEg0015B10r2	-	-	3e-1	At1g07950	surfeit locus protein 5 family protein / SURF5 family protein	C.G.	S.X.	Please select
0.06	3e-2	40	Oryza sativa	Os07g0272600	9635.m01726	-	-	1e-3	At3g27750	-	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	1e+0	34	Populus trichocarpa	PtpAffx.74828.1.S1_at	CB239366	-	-	2e+1	At1g32361	ATL1F	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.06	3e-3	42	Triticum aestivum	TaAffx.22782.1.S1_at	CA745054	-	-	7e-1	At5g65495	unknown protein	C.G.	S.X.	Please select
0.04	9e-1	32	Vitis vinifera	1612270_s_at	CB343656	hypothetical protein LOC100268138	-	5e-21	At3g59540	60S ribosomal protein L38 (RPL38B)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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