Gene omics information

Query gene ID ZmAffx.840.1.A1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.4759.9ZmAffx.840.1.A1_atAI770592--2e-1At1g36940unknown proteinS.X.H.G.
0.5775.1Zm.7750.3.S1_atAY105255.1--3e-35At5g62690TUB2S.X.H.G.
0.4048.5ZmAffx.1316.1.S1_at40794996-30--6e-1At1g78172unknown proteinS.X.H.G.
0.3336.0Zm.629.1.S1_atAF127021.1RNA polymerase T phage-like 1-9e-15At1g68990DNA-directed RNA polymerase, mitochondrial (RPOMT)S.X.H.G.
0.3336.0Zm.7016.1.A1_atAY103859.1--3e-1At5g44610MAP18 (Microtubule-associated Protein 18)S.X.H.G.
0.2724.6ZmAffx.151.1.S1_atAI667841--2e-10At1g50140ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide bindingS.X.H.G.
0.1710.6Zm.17818.1.A1_atCK145213--6e+0At5g52470FIB1 (FIBRILLARIN 1)S.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
51.0100.0GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
36.099.9GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
22.599.5GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
22.599.5GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
20.799.4GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
17.899.1GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
17.399.1GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
15.398.9GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.698.4GSM320464protocol: Methylation filtration (MF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.598.4GSM320461protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.582e-129460ZmAffx.840.1.S1_atAI770592--2e-1At1g36940unknown proteinC.G.S.X.
0.074e-754Zm.13569.1.S1_atAY107969.1--1e-11At1g74650MYB31 (MYB DOMAIN PROTEIN 31)C.G.S.X.
0.051e-652Zm.11694.1.A1_atCK369414R2R3MYB-domain protein-2e-5At3g12820AtMYB10 (myb domain protein 10)C.G.S.X.
0.051e-652Zm.11694.1.S1_atCK369414R2R3MYB-domain protein-3e-4At3g23250MYB15 (MYB DOMAIN PROTEIN 15)C.G.S.X.
0.044e-444Zm.2246.1.A1_atCO528601lipid binding protein-1e-1At3g61530PANB2C.G.S.X.
0.062e-238Zm.14527.1.A1_atBI542536R2R3MYB-domain protein-5e-15At3g01140MYB106 (myb domain protein 106)C.G.S.X.
0.062e-238Zm.14527.1.S1_atBI542536hypothetical protein LOC100279555-5e-15At3g01140MYB106 (myb domain protein 106)C.G.S.X.
0.019e-236Zm.14342.1.S1_atCA399127--2e-24At1g53050protein kinase family proteinC.G.S.X.
0.029e-236Zm.13829.1.A1_atAY104407.1hypothetical protein LOC100193761-2e-1At5g03980GDSL-motif lipase/hydrolase family proteinC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.042e-136Arabidopsis thalianaAt1g36940840603unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P---C.G.S.X.
0.053e-136Glycine maxGmaAffx.71325.1.S1_atAW596401--2e-7At2g41940ZFP8 (ZINC FINGER PROTEIN 8)C.G.S.X.
0.052e-238Hordeum vulgareContig5841_atContig5841--4e-6At3g23250MYB15 (MYB DOMAIN PROTEIN 15)C.G.S.X.
0.101e-25117Oryza sativaOs07g0629000AY323480.1-P-type R2R3 Myb protein (Fragment)1e-5At5g61420MYB28 (myb domain protein 28)C.G.S.X.
0.072e-240Populus trichocarpaPtpAffx.28813.1.S1_atDN500996hypothetical protein-4e-47At5g15310ATMYB16 (MYB DOMAIN PROTEIN 16)C.G.S.X.
0.129e-1063Triticum aestivumTaAffx.106463.1.S1_atCA718492--2e-8At4g22680MYB85 (myb domain protein 85)C.G.S.X.
0.046e-236Vitis vinifera1607866_atCB969549hypothetical protein LOC100255658-4e+0At4g21090adrenodoxin-like ferredoxin 1C.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage