Gene omics information

Query gene ID	ZmAffx.775.1.A1_at
Gene name	S-ribonuclease binding protein SBP1
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.90	97.0	ZmAffx.775.1.A1_at	AI746211	S-ribonuclease binding protein SBP1	-	8e-1	At4g32480	unknown protein	S.X.	H.G.	Please select
0.52	67.3	Zm.4471.5.A1_at	BF729171	protein kinase APK1B	-	2e-2	At3g47510	unknown protein	S.X.	H.G.	Please select
0.46	58.4	Zm.17742.1.A1_at	AW042536	hypothetical protein LOC100279932	-	6e-9	At5g51220	ubiquinol-cytochrome C chaperone family protein	S.X.	H.G.	Please select
0.45	56.4	Zm.13542.1.S1_at	AY108280.1	Transcription factor MYB31	-	4e-24	At4g38620	MYB4	S.X.	H.G.	Please select
0.45	56.4	Zm.4640.1.A1_at	CF623843	KH domain containing protein	-	3e+0	At2g31085	CLE6 (CLAVATA3/ESR-RELATED 6)	S.X.	H.G.	Please select
0.43	52.8	Zm.10123.1.S1_at	BM380717	heat- and acid-stable phosphoprotein	-	3e-14	At5g46020	unknown protein	S.X.	H.G.	Please select
0.40	48.5	Zm.9194.1.A1_at	BM267243	-	-	1e+0	At3g03456	unknown protein	S.X.	H.G.	Please select
0.38	44.2	Zm.2668.1.A1_at	CB334210	hypothetical protein LOC100193351	-	4e+0	At1g01050	AtPPa1 (Arabidopsis thaliana pyrophosphorylase 1)	S.X.	H.G.	Please select
0.34	37.2	Zm.9926.1.A1_at	CA401778	-	-	7e-1	At4g15790	unknown protein	S.X.	H.G.	Please select
0.34	37.2	Zm.16713.1.A1_at	AY108582.1	hypothetical protein LOC100192650	-	3e+0	At2g40590	40S ribosomal protein S26 (RPS26B)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
11.0	98.5	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.9	98.2	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.0	98.0	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.0	98.0	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.6	97.6	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.4	97.5	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.9	97.3	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.6	97.1	GSM253280	ZM_8d_SG200_3Alu_I	GSE10023	Maize gene expression during infection with Ustilago maydis
4.4	96.2	GSM253282	ZM_8d_SG200_3Alu_III	GSE10023	Maize gene expression during infection with Ustilago maydis
4.3	96.1	GSM253281	ZM_8d_SG200_3Alu_II	GSE10023	Maize gene expression during infection with Ustilago maydis

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.67	7e-135	478	ZmAffx.775.1.S1_at	AI746211	-	-	8e-1	At4g32480	unknown protein	C.G.	S.X.	Please select
0.04	8e-2	36	Zm.8194.1.A1_at	BM380105	hypothetical protein LOC100274820 /// hypothetical protein LOC100276986	-	7e+0	At5g04750	F1F0-ATPase inhibitor protein, putative	C.G.	S.X.	Please select
0.03	8e-2	36	Zm.17828.1.A1_at	BI542933	hypothetical protein LOC100278045	-	6e+0	At4g15830	binding	C.G.	S.X.	Please select
0.05	8e-2	36	Zm.15216.1.A1_at	BM335032	protein transport protein Sec61 beta subunit	-	2e-2	At5g60460	sec61beta family protein	C.G.	S.X.	Please select
0.03	8e-2	36	Zm.10480.1.S1_at	BM332553	polcalcin Jun o 2	-	2e+0	At4g08230	glycine-rich protein	C.G.	S.X.	Please select
0.06	3e-1	34	ZmAffx.584.1.A1_at	AI714950	-	-	2e+1	At5g03690	fructose-bisphosphate aldolase, putative	C.G.	S.X.	Please select
0.06	3e-1	34	ZmAffx.584.1.S1_at	AI714950	-	-	2e+1	At5g03690	fructose-bisphosphate aldolase, putative	C.G.	S.X.	Please select
0.02	3e-1	34	Zm.9115.1.A1_at	CO525291	hypothetical protein LOC100273230	-	2e+0	At5g51650	unknown protein	C.G.	S.X.	Please select
0.03	3e-1	34	Zm.6210.2.A1_at	CF631508	vacuolar ATP synthase 16 kDa proteolipid subunit	-	7e-31	At1g19910	AVA-P2	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	8e-1	34	Arabidopsis thaliana	At4g32480	829383	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	7e-2	38	Glycine max	PsAffx.C38000037_at	PsAffx.C38000037	-	-	1e+0	At4g03965	protein binding / zinc ion binding	C.G.	S.X.	Please select
0.14	4e-16	83	Hordeum vulgare	Contig11797_s_at	Contig11797	-	-	1e+1	At4g21216	unknown protein	C.G.	S.X.	Please select
0.05	3e-29	129	Oryza sativa	Os11g0523800	AK071997.1	-	Transcriptional factor B3 family protein	3e-18	At5g62000	ARF2 (AUXIN RESPONSE FACTOR 2)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	1e+0	34	Populus trichocarpa	PtpAffx.41925.1.S1_at	DN492471	-	-	1e+0	At3g01319	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.16	4e-12	71	Triticum aestivum	Ta.11975.1.S1_at	BQ171190	-	-	8e+0	At4g32480	unknown protein	C.G.	S.X.	Please select
0.03	4e+0	30	Vitis vinifera	1611064_at	CF373637	hypothetical protein LOC100258224	-	3e-1	At3g17820	ATGSKB6	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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