Gene omics information

Query gene ID	ZmAffx.767.1.A1_at
Gene name	hypothetical protein LOC100273842
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.80	94.0	ZmAffx.767.1.A1_at	AI746090	hypothetical protein LOC100273842	-	3e+0	At4g18090	unknown protein	S.X.	H.G.	Please select
0.92	99.2	ZmAffx.133.1.S1_at	AI666263	-	-	4e+0	At5g59780	MYB59 (MYB DOMAIN PROTEIN 59)	S.X.	H.G.	Please select
0.91	99.0	ZmAffx.161.1.S1_at	AI668163	Hypothetical protein LOC100193378	-	3e+0	At4g17560	ribosomal protein L19 family protein	S.X.	H.G.	Please select
0.91	99.0		-	-	-	0			S.X.	H.G.	Please select
0.91	99.0	ZmAffx.1353.1.S1_at	40794996-44	-	-	6e-1	At5g35338	-	S.X.	H.G.	Please select
0.89	96.8	ZmAffx.1358.1.S1_at	40794996-159	-	-	0	Atmg01170	-	S.X.	H.G.	Please select
0.88	96.7	ZmAffx.1355.1.S1_at	40794996-45	-	-	7e-138	Atmg00640	-	S.X.	H.G.	Please select
0.88	96.7	ZmAffx.1390.1.S1_at	40794996-65	-	-	0	Atmg00900	-	S.X.	H.G.	Please select
0.88	96.7	ZmAffx.545.1.A1_at	AI712101	-	-	6e-1	At2g17170	protein kinase family protein	S.X.	H.G.	Please select
0.88	96.7	ZmAffx.1188.1.S1_at	BE025244	-	-	3e+0	At5g46620	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
23.2	99.5	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
22.8	99.5	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
20.6	99.3	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
17.5	99.1	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
15.6	99.0	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.5	98.9	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.4	98.9	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.2	98.8	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.7	98.5	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.8	97.2	GSM162267	Mutant 1 with array type maize from Affymetrix	GSE7030	Phenotypic and molecular characterisation of a novel Bt2 allele in maize

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
1.00	0	807	ZmAffx.767.1.S1_at	AI746090	-	-	3e+0	At4g18090	unknown protein	C.G.	S.X.	Please select
1.00	0	807	ZmAffx.767.1.S1_a_at	AI746090	-	-	3e+0	At4g18090	unknown protein	C.G.	S.X.	Please select
0.03	3e-1	34	Zm.7616.1.S1_at	BM079205	hypothetical protein LOC100192708	-	3e-12	At1g51390	NFU5	C.G.	S.X.	Please select
0.04	5e+0	30	ZmAffx.577.1.A1_at	AI714809	-	-	2e+0	At1g80745	unknown protein	C.G.	S.X.	Please select
0.04	5e+0	30	ZmAffx.577.1.S1_at	AI714809	-	-	2e+0	At1g80745	unknown protein	C.G.	S.X.	Please select
0.03	5e+0	30	ZmAffx.1340.1.S1_at	11990232-88	-	-	7e-45	Atcg01080	-	C.G.	S.X.	Please select
0.03	5e+0	30	Zm.6954.1.S1_at	CF006215	-	-	2e-19	At4g14240	-	C.G.	S.X.	Please select
0.02	5e+0	30	Zm.5256.1.A1_at	BG841155	-	-	1e-5	At2g20060	ribosomal protein L4 family protein	C.G.	S.X.	Please select
0.01	5e+0	30	Zm.1653.2.A1_a_at	AY104306.1	histone deacetylase	-	8e-44	At3g44680	HDA9 (HISTONE DEACETYLASE 9)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	3e+0	32	Arabidopsis thaliana	At4g18090	827534	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OP	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.05	1e+0	34	Glycine max	HgAffx.22703.1.S1_at	BG310847	-	-	2e+0	At5g38330	LCR80 (Low-molecular-weight cysteine-rich 80)	C.G.	S.X.	Please select
0.04	6e+0	30	Hordeum vulgare	HA24I18r_at	HA24I18r	-	-	3e+0	At2g45760	BAP2 (BON ASSOCIATION PROTEIN 2)	C.G.	S.X.	Please select
0.11	7e-15	81	Oryza sativa	Os06g0358800	AK107404.1	-	Ribonuclease III domain containing protein	3e+0	At1g49930	-	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	4e+0	32	Populus trichocarpa	PtpAffx.94683.1.A1_at	CV275605	-	-	3e-1	At1g21910	AP2 domain-containing transcription factor family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	2e-1	36	Triticum aestivum	Ta.19563.1.S1_at	CA653401	-	-	1e+0	At5g58540	protein kinase family protein	C.G.	S.X.	Please select
0.03	9e-1	32	Vitis vinifera	1613696_at	CA817501	hypothetical protein LOC100242891	-	1e+0	At2g25720	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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