CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID ZmAffx.750.1.A1_at

Gene name hypothetical protein LOC100275058

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.70 87.0 ZmAffx.750.1.A1_at AI677184 hypothetical protein LOC100275058 - 9e-1 At5g16200 50S ribosomal protein-related S.X. H.G.
0.51 66.4 Zm.9660.1.A1_at BM341687 - - 5e+0 At4g13095 LCR37 (Low-molecular-weight cysteine-rich 37) S.X. H.G.
0.48 61.3 Zm.13670.1.A1_at AY107037.1 hypothetical protein LOC100276497 - 3e-3 At5g34930 arogenate dehydrogenase S.X. H.G.
0.46 58.4 Zm.14540.2.S1_at AY105526.1 RNA-binding region RNP-1 - 5e+0 At3g52105 unknown protein S.X. H.G.
0.38 44.2 ZmAffx.186.1.A1_at AI668363 hypothetical protein LOC100217123 - 6e-5 At5g19690 STT3A (STAUROSPORIN AND TEMPERATURE SENSITIVE 3-LIKE A) S.X. H.G.
0.36 41.3 Zm.17730.1.A1_at CK370416 - - 2e-1 At4g33210 F-box family protein (FBL15) S.X. H.G.
0.33 36.0 Zm.3406.1.S1_at AY566301.1 4-coumarate coenzyme A ligase - 7e-2 At1g51680 4CL1 (4-COUMARATE:COA LIGASE 1) S.X. H.G.
0.32 33.4 Zm.4656.1.A1_at CF635280 IDP334 protein - 4e-35 At1g16890 ubiquitin-conjugating enzyme, putative S.X. H.G.
0.32 33.4 - - - 0 S.X. H.G.
0.32 33.4 Zm.12305.1.A1_at BQ621105 DNA binding protein - 2e+0 At5g53700 - S.X. H.G.
Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
25.9 99.6 GSM205367 Mo17xB73 13 DAP endosperm tissue biological replicate 1 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
22.7 99.5 GSM205371 Mo17xB73 13 DAP endosperm tissue biological replicate 2 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
22.5 99.5 GSM205365 Mo17 13 DAP endosperm tissue biological replicate 1 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
21.2 99.4 GSM205369 Mo17 13 DAP endosperm tissue biological replicate 2 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
21.0 99.4 GSM205375 Mo17xB73 13 DAP endosperm tissue biological replicate 3 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
19.7 99.3 GSM205373 Mo17 13 DAP endosperm tissue biological replicate 3 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
19.1 99.2 GSM205376 B73xMo17 13 DAP endosperm tissue biological replicate 3 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
18.7 99.2 GSM205374 B73 13 DAP endosperm tissue biological replicate 3 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
15.8 99.0 GSM205370 B73 13 DAP endosperm tissue biological replicate 2 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
14.8 98.9 GSM205372 B73xMo17 13 DAP endosperm tissue biological replicate 2 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
1.00 0 910 ZmAffx.750.1.S1_at AI677184 - - 9e-1 At5g16200 50S ribosomal protein-related C.G. S.X.
0.21 8e-21 99 Zm.13985.1.A1_at AY108836.1 hypothetical protein LOC100276500 - 3e-1 At3g60260 phagocytosis and cell motility protein ELMO1-related C.G. S.X.
0.14 8e-21 99 Zm.13985.1.S1_at AY108836.1 - - 3e-1 At3g60260 phagocytosis and cell motility protein ELMO1-related C.G. S.X.
0.04 6e-3 40 Zm.8133.1.S1_at BM073040 - - 6e+0 At3g52160 KCS15 (3-KETOACYL-COA SYNTHASE 15) C.G. S.X.
0.03 4e-1 34 Zm.15585.1.A1_at CD439643 hypothetical protein LOC100276769 - 4e-4 At3g05550 hypoxia-responsive family protein C.G. S.X.
0.02 2e+0 32 Zm.9840.1.A1_at CK826945 - - 1e-1 At1g08500 plastocyanin-like domain-containing protein C.G. S.X.
0.02 2e+0 32 Zm.94.1.A1_at X79934.1 Dof2 - 1e-7 At2g28810 Dof-type zinc finger domain-containing protein C.G. S.X.
0.02 2e+0 32 Zm.94.1.S1_at X79934.1 Dof2 - 1e-7 At2g28810 Dof-type zinc finger domain-containing protein C.G. S.X.
0.02 2e+0 32 Zm.6973.1.A1_at AY109828.1 Hypothetical protein LOC100216936 - 5e-1 At4g28830 methyltransferase/ nucleic acid binding C.G. S.X.
Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 9e-1 34 Arabidopsis thaliana At5g16200 831478 50S ribosomal protein-related F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P - - - C.G. S.X.
0.04 8e-2 38 Glycine max Gma.15688.2.S1_a_at BM309524 - - 3e+0 At4g10810 unknown protein C.G. S.X.
0.04 2e+0 32 Hordeum vulgare Contig21083_at Contig21083 - - 9e-1 At4g01590 unknown protein C.G. S.X.
0.04 5e-1 36 Oryza sativa Os10g0316300 NM_195586.1 - - 9e-1 At5g09600 SDH3-1 C.G. S.X.
0.04 3e-1 36 Populus trichocarpa PtpAffx.70114.1.A1_at CV231521 - - 7e-8 At4g36870 BLH2 (BEL1-LIKE HOMEODOMAIN 2) C.G. S.X.
0.04 2e-1 36 Triticum aestivum TaAffx.30693.1.S1_at CA622875 - - 3e+0 At5g27910 NF-YC8 (NUCLEAR FACTOR Y, SUBUNIT C8) C.G. S.X.
0.04 1e+0 32 Vitis vinifera 1614969_at CA810356 hypothetical protein LOC100252305 - 3e+0 At4g00390 transcription regulator C.G. S.X.
Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage