Gene omics information

Query gene ID	ZmAffx.734.1.A1_at
Gene name
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.83	95.6	ZmAffx.734.1.A1_at	AI740044	-	-	1e+1	At5g01670	aldose reductase, putative	S.X.	H.G.	Please select
0.59	76.1	Zm.13162.1.A1_at	CO521967	-	-	9e-3	At3g02040	SRG3 (senescence-related gene 3)	S.X.	H.G.	Please select
0.55	71.6	ZmAffx.71.1.S1_at	AI665169	-	-	3e+0	At1g50640	ERF3 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 3)	S.X.	H.G.	Please select
0.46	58.4	ZmAffx.459.1.S1_at	AI677212	-	-	8e-1	At1g26910	60S ribosomal protein L10 (RPL10B)	S.X.	H.G.	Please select
0.36	41.3	Zm.4359.2.A1_x_at	AI795776	EMB2756	-	2e+0	At5g52160	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	S.X.	H.G.	Please select
0.25	21.3	Zm.155.1.A1_a_at	AI667827	brittle endosperm1	-	4e-3	At4g32400	SHS1 (SODIUM HYPERSENSITIVE 1)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
31.4	99.8	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
30.4	99.8	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
29.1	99.8	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
28.8	99.7	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
24.7	99.6	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
24.4	99.6	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.1	98.8	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.5	98.8	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.1	98.5	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.7	97.2	GSM320458	protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
1.00	0	795	ZmAffx.734.1.S1_at	AI740044	-	-	1e+1	At5g01670	aldose reductase, putative	C.G.	S.X.	Please select
0.01	1e+0	32	Zm.221.1.A1_at	U28376.1	calcium-dependent protein kinase	-	4e-25	At3g20410	CPK9 (calmodulin-domain protein kinase 9)	C.G.	S.X.	Please select
0.02	1e+0	32	Zm.1426.1.S1_at	CA400017	-	-	7e-35	At2g06530	VPS2.1	C.G.	S.X.	Please select
0.02	5e+0	30	Zm.6688.1.A1_at	BQ538665	hypothetical protein LOC100275476	-	3e+0	At1g68862	unknown protein	C.G.	S.X.	Please select
0.01	5e+0	30	Zm.3296.1.S1_at	AF440219.1	MSI type nucleosome/chromatin assembly factor C	-	2e-35	At5g58230	MSI1 (MULTICOPY SUPRESSOR OF IRA1)	C.G.	S.X.	Please select
0.02	5e+0	30	Zm.316.1.A1_at	CO519149	knotted1 induced1	-	1e-1	At5g35220	EGY1 (ETHYLENE-DEPENDENT GRAVITROPISM-DEFICIENT AND YELLOW-GREEN 1)	C.G.	S.X.	Please select
0.02	5e+0	30	Zm.16959.2.A1_at	CK347555	hypothetical protein LOC100274593	-	1e-13	At3g46230	ATHSP17.4	C.G.	S.X.	Please select
0.01	5e+0	30	Zm.16.1.A1_at	L00623.1	opaque2 heterodimerizing protein1	-	8e-1	At4g02640	BZO2H1	C.G.	S.X.	Please select
0.01	5e+0	30	Zm.156.1.A1_at	L06478.1	opaque2 heterodimerizing protein2	-	1e-2	At3g54620	BZIP25 (BASIC LEUCINE ZIPPER 25)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	1e+1	30	Arabidopsis thaliana	At5g01670	831701	aldose reductase, putative	F:oxidoreductase activity;P:oxidation reduction;C:unknown;BMOFPA	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	4e+0	32	Glycine max	PsAffx.CL1702Contig1_s_at	PsAffx.CL1702Contig1	-	-	4e+0	At3g22930	calmodulin, putative	C.G.	S.X.	Please select
0.10	7e-9	59	Hordeum vulgare	Contig17398_at	Contig17398	-	-	5e-1	At1g72175	zinc finger (C3HC4-type RING finger) family protein	C.G.	S.X.	Please select
0.04	2e+1	30	Oryza sativa	OsAffx.9842.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	1e+0	34	Populus trichocarpa	PtpAffx.5489.1.A1_at	CV245907	-	-	1e+0	At3g12710	methyladenine glycosylase family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.10	1e-8	59	Triticum aestivum	TaAffx.20369.1.S1_at	CD909771	-	-	2e+0	At4g12210	zinc finger (C3HC4-type RING finger) family protein	C.G.	S.X.	Please select
0.04	4e+0	30	Vitis vinifera	1612081_at	CA815649	hypothetical protein LOC100244532	-	5e-5	At3g23700	S1 RNA-binding domain-containing protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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