CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID ZmAffx.7.1.S1_at

Gene name monosaccharide transport protein 1

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.73 89.9 ZmAffx.7.1.S1_at AY683004.1 monosaccharide transport protein 1 - 4e-9 At1g50310 STP9 (SUGAR TRANSPORTER 9) S.X. H.G.
0.40 48.5 Zm.4871.1.A1_at AY109978.1 growth-regulating factor 1 - 1e-18 At2g22840 AtGRF1 (GROWTH-REGULATING FACTOR 1) S.X. H.G.
0.36 41.3 Zm.5178.1.A1_a_at AI612308 IAA-amino acid hydrolase ILR1-like 3 - 1e+0 At3g02875 ILR1 (IAA-LEUCINE RESISTANT 1) S.X. H.G.
0.36 41.3 Zm.4563.1.A1_at AI734806 - - 2e-1 At5g23920 unknown protein S.X. H.G.
0.15 8.6 Zm.17544.1.A1_at CF004915 thylakoid membrane phosphoprotein 14 kda - 3e-2 At2g46820 PSI-P (PHOTOSYSTEM I P SUBUNIT) S.X. H.G.
0.13 6.8 Zm.5172.1.A1_at BM266341 - - 1e-1 At1g79960 OFP14 (OVATE FAMILY PROTEIN 14) S.X. H.G.
Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
28.8 99.7 GSM253282 ZM_8d_SG200_3Alu_III GSE10023 Maize gene expression during infection with Ustilago maydis
18.4 99.2 GSM253281 ZM_8d_SG200_3Alu_II GSE10023 Maize gene expression during infection with Ustilago maydis
17.2 99.1 GSM253280 ZM_8d_SG200_3Alu_I GSE10023 Maize gene expression during infection with Ustilago maydis
14.7 98.9 GSM320443 protocol: mRNA - genotype: Mo17 maize inbred - rep3 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.0 98.5 GSM320439 protocol: mRNA - genotype: B73 maize inbred - rep2 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.8 98.5 GSM320445 protocol: mRNA - genotype: CML69 maize inbred - rep2 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.1 98.4 GSM320442 protocol: mRNA - genotype: Mo17 maize inbred - rep2 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.0 98.4 GSM320440 protocol: mRNA - genotype: B73 maize inbred - rep3 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.3 98.2 GSM320441 protocol: mRNA - genotype: Mo17 maize inbred - rep1 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.3 98.2 GSM320446 protocol: mRNA - genotype: CML69 maize inbred - rep3 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.39 0 690 Zm.11804.1.A1_s_at BM380880 monosaccharide transport protein 1 - 2e+1 At5g44110 POP1 C.G. S.X.
0.37 1e-158 559 Zm.18239.1.S1_at CN845401 sugar carrier protein C - 1e-1 At5g41090 anac095 (Arabidopsis NAC domain containing protein 95) C.G. S.X.
0.39 5e-56 218 Zm.1777.1.A1_at AY110696.1 hypothetical protein LOC100279457 - 3e-4 At4g21480 carbohydrate transmembrane transporter/ sugar:hydrogen symporter C.G. S.X.
0.14 1e-41 171 Zm.4089.2.A1_at BQ619190 - - 3e-6 At5g26340 MSS1 C.G. S.X.
0.25 1e-41 171 Zm.4089.2.S1_at BQ619190 - - 3e-6 At5g26340 MSS1 C.G. S.X.
0.11 2e-27 123 Zm.4089.1.S1_at AY108577.1 - - 8e-2 At5g26340 MSS1 C.G. S.X.
0.19 2e-15 83 Zm.1324.1.A1_at AY106711.1 hypothetical protein LOC100274108 - 1e-1 At4g02050 sugar transporter, putative C.G. S.X.
0.12 7e-15 81 Zm.13072.1.S1_at CD438321 hypothetical protein LOC100193044 - 7e+0 At5g12880 proline-rich family protein C.G. S.X.
0.11 1e-13 77 Zm.4347.1.A1_at CD434952 - - 1e-2 At3g60340 palmitoyl protein thioesterase family protein C.G. S.X.
Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.10 4e-9 63 Arabidopsis thaliana At1g50310 841453 STP9 (SUGAR TRANSPORTER 9) F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:transport, transmembrane transport;C:integral to membrane, membrane;BFMPOA - - - C.G. S.X.
0.11 1e-6 56 Glycine max GmaAffx.92466.1.A1_at CF808191 - - 2e-25 At5g26340 MSS1 C.G. S.X.
0.28 3e-36 153 Hordeum vulgare Contig9662_at Contig9662 - - 4e-15 At5g26340 MSS1 C.G. S.X.
0.69 0 1517 Oryza sativa Os07g0106200 AK099079.1 - Monosaccharide transporter 3 8e-20 At1g11260 STP1 (SUGAR TRANSPORTER 1) C.G. S.X.
0.12 9e-14 79 Populus trichocarpa PtpAffx.224567.1.S1_s_at pmrna43218 hypothetical protein - 5e-42 At1g50310 STP9 (SUGAR TRANSPORTER 9) C.G. S.X.
0.68 0 1096 Triticum aestivum Ta.12517.1.S1_at CK163074 - - 1e-9 At1g50310 STP9 (SUGAR TRANSPORTER 9) C.G. S.X.
0.02 4e-3 42 Vitis vinifera 1616083_at CB009608 hypothetical protein LOC100263644 - 6e-39 At1g11260 STP1 (SUGAR TRANSPORTER 1) C.G. S.X.
Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage