Gene omics information

Query gene ID ZmAffx.60.1.S1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9799.9ZmAffx.60.1.S1_atAI665094--8e-1At2g41650unknown proteinS.X.H.G.
0.5469.8ZmAffx.219.1.A1_atAI670227--3e+0At3g30430F-box family proteinS.X.H.G.
0.4759.9Zm.5969.2.A1_a_atAI629909hypothetical protein LOC100272999 /// hypothetical protein LOC100273990-2e+0At5g59030COPT1 (copper transporter 1)S.X.H.G.
0.4759.9Zm.3983.2.S1_atAI820263--8e-1At3g60510enoyl-CoA hydratase/isomerase family proteinS.X.H.G.
0.4759.9Zm.10553.1.A1_atCD441187--4e+0At1g22710SUC2 (SUCROSE-PROTON SYMPORTER 2)S.X.H.G.
0.4658.4Zm.13322.1.A1_atBM895136--1e+0At1g52855unknown proteinS.X.H.G.
0.4556.4ZmAffx.109.1.S1_atAI665560--8e-1At4g09270unknown proteinS.X.H.G.
0.4556.4Zm.18873.1.A1_atAY103904.1--4e-1At5g42232-S.X.H.G.
0.4455.7Zm.16325.1.A1_atCF243460hypothetical protein LOC100276031-3e-3At1g29840esterase/lipase/thioesterase family proteinS.X.H.G.
0.4455.7Zm.14692.1.A1_s_atBQ539260hypothetical protein LOC100276042-5e+0At1g09195-S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
38.499.9GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
30.099.8GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
29.099.8GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
16.599.0GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
15.799.0GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
15.499.0GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.598.8GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.598.7GSM320457protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.598.6GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.398.0GSM320459protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
1.000765ZmAffx.60.1.A1_atAI665094--8e-1At2g41650unknown proteinC.G.S.X.
0.062e-238ZmAffx.20.1.A1_atAI600385--3e+0At4g02550unknown proteinC.G.S.X.
0.062e-238ZmAffx.20.1.S1_atAI600385--3e+0At4g02550unknown proteinC.G.S.X.
0.049e-236ZmAffx.781.1.A1_atAI746268--1e+1At4g37450AGP18 (ARABINOGALACTAN PROTEIN 18)C.G.S.X.
0.049e-236ZmAffx.781.1.S1_atAI746268--1e+1At4g37450AGP18 (ARABINOGALACTAN PROTEIN 18)C.G.S.X.
0.029e-236Zm.2826.1.S1_atBM333443hypothetical protein LOC100192989-2e-62At3g46060ATRAB8AC.G.S.X.
0.039e-236Zm.15291.1.S1_atBG841534CONSTANS-like protein CO6-1e-1At4g15490UGT84A3C.G.S.X.
0.023e-134Zm.5351.1.S1_atAI619365--5e-1At1g56200emb1303 (embryo defective 1303)C.G.S.X.
0.023e-134Zm.4780.1.S1_atCF057781--3e+0At4g31580SRZ-22C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.078e-134Arabidopsis thalianaAt2g41650818763unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;P---C.G.S.X.
0.041e+034Glycine maxPsAffx.C186000040_atPsAffx.C186000040--4e+0At5g24155squalene monooxygenase, putative / squalene epoxidase, putativeC.G.S.X.
0.209e-33139Hordeum vulgareContig7508_atContig7508--8e-25At5g67370unknown proteinC.G.S.X.
0.191e-59230Oryza sativaOs03g0439700AK065720.1-Protein of unknown function DUF1230 family protein2e-16At5g67370unknown proteinC.G.S.X.
0.044e+032Populus trichocarpaPtpAffx.98083.1.S1_atBU894741hypothetical protein-2e+0At1g42990ATBZIP60 (BASIC REGION/LEUCINE ZIPPER MOTIF 60)C.G.S.X.
0.257e-29127Triticum aestivumTa.2396.3.A1_atCA680796--1e+0At5g60440AGL62 (Agamous-like 62)C.G.S.X.
0.049e-132Vitis vinifera1617536_atCB972671--4e-3At4g31460ribosomal protein L28 family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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