Gene omics information

Query gene ID ZmAffx.60.1.A1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7389.9ZmAffx.60.1.A1_atAI665094--8e-1At2g41650unknown proteinS.X.H.G.
0.4455.7Zm.9031.1.S1_atCD441372chloroplast Cu-Zn superoxide dismutase-8e-37At2g28190CSD2 (COPPER/ZINC SUPEROXIDE DISMUTASE 2)S.X.H.G.
0.4455.7Zm.2321.3.A1_a_atBG841291hypothetical protein LOC100191581 /// hypothetical protein LOC100274569-3e-9At3g23050IAA7 (INDOLE-3-ACETIC ACID 7)S.X.H.G.
0.3538.9Zm.7544.1.A1_atBM334017mRNA-3e-2At3g20650mRNA capping enzyme family proteinS.X.H.G.
0.3233.4Zm.8723.1.A1_a_atBM351794hypothetical protein LOC100277811-3e-1At3g28321unknown proteinS.X.H.G.
0.2521.3Zm.4027.2.A1_atCO527250hypothetical protein LOC100272558-6e-1At1g49600ATRBP47A (Arabidopsis thaliana RNA-binding protein 47a)S.X.H.G.
0.2014.2Zm.3518.1.A1_atBM337627--1e+0At2g22000PROPEP6 (Elicitor peptide 6 precursor)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
28.299.7GSM253270ZM_4.5d_Mock_3inf_IIIGSE10023Maize gene expression during infection with Ustilago maydis
22.299.4GSM253256ZM_2d_Mock_3inf_IGSE10023Maize gene expression during infection with Ustilago maydis
17.499.1GSM320441protocol: mRNA - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
17.499.1GSM253268ZM_4.5d_Mock_3inf_IGSE10023Maize gene expression during infection with Ustilago maydis
12.798.7GSM253269ZM_4.5d_Mock_3inf_IIGSE10023Maize gene expression during infection with Ustilago maydis
10.998.5GSM253257ZM_2d_Mock_3inf_IIGSE10023Maize gene expression during infection with Ustilago maydis
10.998.5GSM320442protocol: mRNA - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.898.1GSM253258ZM_2d_Mock_3inf_IIIGSE10023Maize gene expression during infection with Ustilago maydis
7.697.9GSM320439protocol: mRNA - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.797.2GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
1.000765ZmAffx.60.1.S1_atAI665094--8e-1At2g41650unknown proteinC.G.S.X.
0.062e-238ZmAffx.20.1.A1_atAI600385--3e+0At4g02550unknown proteinC.G.S.X.
0.062e-238ZmAffx.20.1.S1_atAI600385--3e+0At4g02550unknown proteinC.G.S.X.
0.049e-236ZmAffx.781.1.A1_atAI746268--1e+1At4g37450AGP18 (ARABINOGALACTAN PROTEIN 18)C.G.S.X.
0.049e-236ZmAffx.781.1.S1_atAI746268--1e+1At4g37450AGP18 (ARABINOGALACTAN PROTEIN 18)C.G.S.X.
0.029e-236Zm.2826.1.S1_atBM333443hypothetical protein LOC100192989-2e-62At3g46060ATRAB8AC.G.S.X.
0.039e-236Zm.15291.1.S1_atBG841534CONSTANS-like protein CO6-1e-1At4g15490UGT84A3C.G.S.X.
0.023e-134Zm.5351.1.S1_atAI619365--5e-1At1g56200emb1303 (embryo defective 1303)C.G.S.X.
0.023e-134Zm.4780.1.S1_atCF057781--3e+0At4g31580SRZ-22C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.078e-134Arabidopsis thalianaAt2g41650818763unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;P---C.G.S.X.
0.041e+034Glycine maxPsAffx.C186000040_atPsAffx.C186000040--4e+0At5g24155squalene monooxygenase, putative / squalene epoxidase, putativeC.G.S.X.
0.209e-33139Hordeum vulgareContig7508_atContig7508--8e-25At5g67370unknown proteinC.G.S.X.
0.191e-59230Oryza sativaOs03g0439700AK065720.1-Protein of unknown function DUF1230 family protein2e-16At5g67370unknown proteinC.G.S.X.
0.044e+032Populus trichocarpaPtpAffx.98083.1.S1_atBU894741hypothetical protein-2e+0At1g42990ATBZIP60 (BASIC REGION/LEUCINE ZIPPER MOTIF 60)C.G.S.X.
0.257e-29127Triticum aestivumTa.2396.3.A1_atCA680796--1e+0At5g60440AGL62 (Agamous-like 62)C.G.S.X.
0.049e-132Vitis vinifera1617536_atCB972671--4e-3At4g31460ribosomal protein L28 family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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