Gene omics information

Query gene ID ZmAffx.536.1.S1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5976.1ZmAffx.536.1.S1_atAI711796--1e+1At5g65430GRF8 (GENERAL REGULATORY FACTOR 8)S.X.H.G.
0.8194.3Zm.5775.1.A1_atAI649573--1e+1At3g06600unknown proteinS.X.H.G.
0.8094.0Zm.53.1.S1_atAB021176.1root cap periphery gene2-2e-1At3g19430late embryogenesis abundant protein-related / LEA protein-relatedS.X.H.G.
0.7590.8Zm.13664.1.S1_atBG836397--6e-17At3g15610transducin family protein / WD-40 repeat family proteinS.X.H.G.
0.6986.5Zm.3908.1.S1_atCF036708hypothetical protein LOC100193155-2e-3At5g15750RNA-binding S4 domain-containing proteinS.X.H.G.
0.6179.5Zm.1039.3.S1_atAI677375Hypothetical protein LOC100194359-3e+0At4g18580unknown proteinS.X.H.G.
0.6179.5Zm.8632.1.A1_atBM268513--5e+0At3g55672-S.X.H.G.
0.5775.1ZmAffx.1052.1.S1_atAI881839KH domain containing protein-3e+0At1g75090methyladenine glycosylase family proteinS.X.H.G.
0.5571.6Zm.17267.1.S1_atCK368940hypothetical protein LOC100275082-5e-1At1g80920J8S.X.H.G.
0.5267.3Zm.16895.1.A1_atBM075234--2e+0At5g15100PIN8 (PIN-FORMED 8)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
33.899.9GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
30.099.8GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
27.799.7GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
25.799.6GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
24.799.6GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
24.599.6GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
24.199.6GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
22.099.4GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
20.899.4GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.796.5GSM320457protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.980791ZmAffx.536.1.A1_atAI711796--1e+1At5g65430GRF8 (GENERAL REGULATORY FACTOR 8)C.G.S.X.
0.195e-37153Zm.4969.1.A1_atCD991522--6e+0At5g59230transcription factor-relatedC.G.S.X.
0.031e+032Zm.5472.1.A1_atAI622092--1e+0At3g19980ATFYPP3 (FLOWER-SPECIFIC, PHYTOCHROME-ASSOCIATED PROTEIN PHOSPHATASE 3)C.G.S.X.
0.035e+030Zm.8244.1.S1_atBM073405--2e+0At1g30972-C.G.S.X.
0.025e+030Zm.661.2.A1_atAF290415.1chloroplast RNA splicing1-6e-2At3g18390EMB1865 (embryo defective 1865)C.G.S.X.
0.025e+030Zm.661.2.S1_a_atCF625277chloroplast RNA splicing1-6e-2At3g18390EMB1865 (embryo defective 1865)C.G.S.X.
0.025e+030Zm.578.1.S1_atAF112150.1MADS box protein 3-3e-3At5g60910AGL8 (agamous-like 8)C.G.S.X.
0.015e+030Zm.497.1.A1_atAF236372.1stomatin-like protein-2e-1At5g54100band 7 family proteinC.G.S.X.
0.035e+030Zm.2372.1.S1_atAY104358.1Hypothetical protein LOC100216968-2e+0At1g76560CP12-3C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.031e+130Arabidopsis thalianaAt5g65430836668GRF8 (GENERAL REGULATORY FACTOR 8)member of 14-3-3 proteins. This protein is reported to interact with the BZR1 transcription factor involved in brassinosteroid signaling and may affect the nucleocytoplasmic shuttling of BZR1---C.G.S.X.
0.047e-238Glycine maxGmaAffx.51101.1.S1_atBU579058--9e-1At2g32030GCN5-related N-acetyltransferase (GNAT) family proteinC.G.S.X.
0.046e+030Hordeum vulgareContig21877_s_atContig21877--3e+0At1g33940-C.G.S.X.
0.022e+034Oryza sativaOs01g0916300AK121997.1-PQBP-1 protein (Nuclear protein containing a WWdomain) (Npw38) (JM26 protein)2e-24At2g41020WW domain-containing proteinC.G.S.X.
0.034e+032Populus trichocarpaPtp.5451.1.S1_atCK116515tubulin, beta chain /// tubulin, beta chain-1e-68At2g29550TUB7C.G.S.X.
0.051e+130Triticum aestivumTaAffx.58874.1.S1_atCA613750--1e+0At3g19710BCAT4 (BRANCHED-CHAIN AMINOTRANSFERASE4)C.G.S.X.
0.049e-132Vitis vinifera1617116_s_atCA817983--3e+0At4g34290SWIB complex BAF60b domain-containing proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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