Gene omics information

Query gene ID ZmAffx.49.1.A1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.98100.0ZmAffx.49.1.A1_atAI664982--3e+0At5g09570-S.X.H.G.
0.6077.8Zm.16476.1.A1_atCO527154lipid binding protein-2e+1At5g15600SP1L4 (SPIRAL1-LIKE4)S.X.H.G.
0.5674.4Zm.2308.1.A1_atBG841336hypothetical protein LOC100276079-2e-2At5g66005Expressed proteinS.X.H.G.
0.5267.3Zm.5083.1.A1_a_atAY103727.1--3e-22At5g22060ATJ2S.X.H.G.
0.4759.9ZmAffx.601.1.S1_atAI715029--8e-1At1g35430unknown proteinS.X.H.G.
0.4658.4Zm.9768.1.A1_atBM338514hypothetical protein LOC100273687-3e-2At1g29730ATP binding / kinase/ protein binding / protein kinase/ protein serine/threonine kinase/ protein tyrosine kinaseS.X.H.G.
0.4251.3Zm.13769.1.S1_atAY105621.1--2e-1At2g21820unknown proteinS.X.H.G.
0.4048.5ZmAffx.106.1.A1_atAI665540--3e+0At4g14060major latex protein-related / MLP-relatedS.X.H.G.
0.4048.5Zm.17839.1.S1_atU12679.1glutathione S-transferase2-1e-1At4g02520ATGSTF2 (GLUTATHIONE S-TRANSFERASE PHI 2)S.X.H.G.
0.3945.6Zm.5753.1.A1_atAW066540smr domain containing protein-7e-1At1g50390fructokinase-relatedS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
10.498.4GSM202277Mo17 11-day seedling aerial tissue biological replicate 1GSE8174Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Seedling data
9.098.2GSM320443protocol: mRNA - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.898.1GSM258176Oh43 11-day seedling aerial tissue biological replicate 1GSE10236Similar patterns of additive and non-additive gene expression in maize hybrids with varying levels of heterosis
8.698.1GSM202407Zmet2 study 11-day seedling aerial tissue genotype Mo17 zmet2-m1 Rep2GSE8188Expression profiling of zmet2-m1 mutants relative to wild-type
8.598.1GSM202406Zmet2 study 11-day seedling aerial tissue genotype Mo17 Rep2GSE8188Expression profiling of zmet2-m1 mutants relative to wild-type
8.398.0GSM202410Zmet2 study 11-day seedling aerial tissue genotype Mo17 Rep3GSE8188Expression profiling of zmet2-m1 mutants relative to wild-type
8.098.0GSM258194Oh43 11-day seedling aerial tissue biological replicate 3GSE10236Similar patterns of additive and non-additive gene expression in maize hybrids with varying levels of heterosis
6.397.4GSM258180Oh43xMo17 11-day seedling aerial tissue biological replicate 1GSE10236Similar patterns of additive and non-additive gene expression in maize hybrids with varying levels of heterosis
5.997.3GSM258185Oh43 11-day seedling aerial tissue biological replicate 2GSE10236Similar patterns of additive and non-additive gene expression in maize hybrids with varying levels of heterosis
5.897.2GSM258184Mo17 11-day seedling aerial tissue biological replicate 2GSE10236Similar patterns of additive and non-additive gene expression in maize hybrids with varying levels of heterosis
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
1.000765ZmAffx.49.1.S1_atAI664982--3e+0At5g09570-C.G.S.X.
0.049e-236Zm.2128.1.S1_atAY105930.1hypothetical protein LOC100216750-1e-8At5g66510GAMMA CA3 (GAMMA CARBONIC ANHYDRASE 3)C.G.S.X.
0.049e-236Zm.15626.1.S1_atCA404507--1e-8At5g66510GAMMA CA3 (GAMMA CARBONIC ANHYDRASE 3)C.G.S.X.
0.011e+032ZmAffx.1429.1.S1_at11990232-14--0Atcg00170-C.G.S.X.
0.021e+032Zm.6944.2.S1_a_atCF008486--2e-158At5g09810ACT7 (ACTIN 7)C.G.S.X.
0.021e+032Zm.7004.1.A1_atCD447791--7e-10At2g33800ribosomal protein S5 family proteinC.G.S.X.
0.031e+032Zm.6758.1.A1_atCF623725hypothetical protein LOC100279733-2e+0At4g35480RHA3BC.G.S.X.
0.031e+032Zm.5663.1.A1_atCA399708hypothetical protein LOC100193372-4e-4At5g27730unknown proteinC.G.S.X.
0.021e+032Zm.3099.1.S1_atCO522746--3e-3At3g11820SYP121 (SYNTAXIN OF PLANTS 121)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.053e+032Arabidopsis thalianaAt5g09570830816-F:molecular_function unknown;P:biological_process unknown;C:chloroplast;PMFO---C.G.S.X.
0.051e+034Glycine maxGmaAffx.92871.1.S1_atCF805895--4e-2At2g28671unknown proteinC.G.S.X.
0.252e-33141Hordeum vulgareHVSMEb0005M12r2_atHVSMEb0005M12r2--3e-1At5g01070zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.123e-26119Oryza sativaOs08g0254900AK120666.1-Hypothetical protein3e+0At5g03610GDSL-motif lipase/hydrolase family proteinC.G.S.X.
0.033e-136Populus trichocarpaPtp.1933.1.A1_atCK093171--5e+0At2g47960unknown proteinC.G.S.X.
0.163e-37155Triticum aestivumTa.4567.1.S1_atBQ168873--5e-2At5g53740unknown proteinC.G.S.X.
0.049e-132Vitis vinifera1620204_atBQ792129--8e-1At1g20070unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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