Gene omics information

Query gene ID ZmAffx.485.1.A1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7590.8ZmAffx.485.1.A1_atAI691349--8e-1Atmg00140-S.X.H.G.
0.6785.8ZmAffx.1019.1.S1_atAI881532--3e+0At2g29070ubiquitin fusion degradation UFD1 family proteinS.X.H.G.
0.6077.8ZmAffx.597.1.A1_atAI715025--8e-1At1g43260-S.X.H.G.
0.5369.1Zm.1436.1.S1_atCB617096beta-hexosaminidase beta chain-5e-2At3g55260HEXO1 (BETA-HEXOSAMINIDASE 1)S.X.H.G.
0.4048.5Zm.5825.1.A1_atAI649790hypothetical protein LOC100279429-1e-2At1g10390nucleoporin family proteinS.X.H.G.
0.3641.3Zm.777.1.S1_a_atCD442368hypothetical protein LOC100272376-4e-8At5g633804-coumarate--CoA ligase family protein / 4-coumaroyl-CoA synthase family proteinS.X.H.G.
0.2928.1Zm.14014.1.A1_atCF050089NADH-ubiquinone oxidoreductase 23 kDa subunit-2e-62At1g79010NADH-ubiquinone oxidoreductase 23 kDa subunit, mitochondrial (TYKY)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
25.999.6GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
25.199.6GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
21.799.4GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
20.599.3GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
19.199.2GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
17.799.1GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
17.299.1GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
16.299.0GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
15.298.9GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.597.8GSM320470protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
1.000759ZmAffx.485.1.S1_atAI691349--8e-1Atmg00140-C.G.S.X.
0.034e-444Zm.9905.1.A1_atAY107944.1IDP680 protein /// hypothetical protein LOC100275890 /// RAB5-interacting protein-8e+0At5g66490unknown proteinC.G.S.X.
0.034e-444Zm.9966.1.A1_atAY107742.1hypothetical protein LOC100191214-1e-42At2g32980unknown proteinC.G.S.X.
0.044e-444Zm.914.1.S1_atCK368496B12D protein-4e-4At3g48140senescence-associated protein, putativeC.G.S.X.
0.024e-444Zm.804.1.A1_atCF627442chaperone protein dnaJ-1e-5At5g48030GFA2 (GAMETOPHYTIC FACTOR 2)C.G.S.X.
0.034e-444Zm.7120.1.S1_a_atAY105061.1hypothetical protein LOC100193616-2e-6At1g17880nascent polypeptide-associated complex (NAC) domain-containing protein / BTF3b-like transcription factor, putativeC.G.S.X.
0.034e-444Zm.7010.2.A1_atAY106286.1--1e-5At1g56110NOP56 (Arabidopsis homolog of nucleolar protein Nop56)C.G.S.X.
0.024e-444Zm.6495.1.A1_atBG841953--1e-2At2g38560TFIIS (TRANSCRIPT ELONGATION FACTOR IIS)C.G.S.X.
0.024e-444Zm.6495.1.S1_atAY105321.1transcription elongation factor A protein 2-1e-2At2g38560TFIIS (TRANSCRIPT ELONGATION FACTOR IIS)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.048e-134Arabidopsis thalianaAtmg00140--hypothetical protein---C.G.S.X.
0.061e-344Glycine maxGmaAffx.8999.2.A1_x_atBI700574--2e+0At1g22280protein phosphatase 2C, putative / PP2C, putativeC.G.S.X.
0.044e-134Hordeum vulgareHVSMEk0023G08r2_atHVSMEk0023G08r2--9e-1At3g16970self-incompatibility protein-relatedC.G.S.X.
0.047e-1581Oryza sativaOs02g0714500AK066821.1-TPR-like domain containing protein8e-3At5g65950unknown proteinC.G.S.X.
0.061e-344Populus trichocarpaPtpAffx.37401.1.A1_s_atCV253800hypothetical protein-7e-1At3g15750unknown proteinC.G.S.X.
0.078e-444Triticum aestivumTaAffx.30022.1.S1_atCA630291--2e+0At3g54290-C.G.S.X.
0.051e-238Vitis vinifera1615678_atCF202538.1--3e-19At1g64520RPN12a (Regulatory Particle non-ATPase 12a)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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