Gene omics information

Query gene ID ZmAffx.477.1.A1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5065.7ZmAffx.477.1.A1_atAI677582--8e-1At5g51860MADS-box protein (AGL72)S.X.H.G.
0.5369.1Zm.18127.1.S1_atCN845217membrin 11-1e-8At5g50440MEMB12 (MEMBRIN 12)S.X.H.G.
0.5065.7ZmAffx.812.1.A1_atAI770420--8e-4At1g49730protein kinase family proteinS.X.H.G.
0.4048.5ZmAffx.237.1.A1_atAI670249--1e+1At5g62480ATGSTU9 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 9)S.X.H.G.
0.3336.0Zm.12306.1.S1_atCO517988hypothetical protein LOC100216558-5e-2At5g19680leucine-rich repeat family proteinS.X.H.G.
0.2318.6Zm.3180.1.A1_atAW179477--7e-1At1g32700zinc-binding family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
11.998.6GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.198.5GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.198.4GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.098.4GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.598.3GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.398.2GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.897.6GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.897.6GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.897.6GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.296.9GSM202285Mo17 11-day seedling aerial tissue biological replicate 3GSE8174Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Seedling data
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
1.000807ZmAffx.477.1.S1_atAI677582--8e-1At5g51860MADS-box protein (AGL72)C.G.S.X.
0.093e-26117Zm.1028.1.S1_atBM380738hypothetical protein LOC100274540-1e-15At3g21690MATE efflux family proteinC.G.S.X.
0.034e-754Zm.18431.1.S1_atCO517527--4e-28At3g21690MATE efflux family proteinC.G.S.X.
0.025e-340Zm.3051.1.A1_atBM348968--4e-2At1g44830AP2 domain-containing transcription factor TINY, putativeC.G.S.X.
0.039e-236Zm.3455.2.A1_atBM266938hypothetical protein LOC100276619-1e-1At2g27390proline-rich family proteinC.G.S.X.
0.043e-134Zm.18026.1.A1_atCF636657--3e-1At4g28240wound-responsive protein-relatedC.G.S.X.
0.041e+032ZmAffx.988.1.S1_atAI834703--3e+0At5g50562unknown proteinC.G.S.X.
0.041e+032ZmAffx.988.1.A1_atAI834703hypothetical protein LOC100279528-3e+0At5g50562unknown proteinC.G.S.X.
0.031e+032Zm.9637.1.A1_atBM334419--4e-1At1g31060unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.038e-134Arabidopsis thalianaAt5g51860835261MADS-box protein (AGL72)F:transcription factor activity;P:regulation of transcription, DNA-dependent;C:nucleus;PMFO---C.G.S.X.
0.077e-238Glycine maxGma.3173.1.S1_atBE820477--5e-13At3g21690MATE efflux family proteinC.G.S.X.
0.044e-134Hordeum vulgareHA10E24r_atHA10E24r--1e+1At4g18400unknown proteinC.G.S.X.
0.063e-2099Oryza sativaOs03g0572900AK102204.1-Multi antimicrobial extrusion protein MatE familyprotein8e-20At3g21690MATE efflux family proteinC.G.S.X.
0.044e+032Populus trichocarpaPtpAffx.219914.1.S1_atpmrna36079hypothetical protein-4e+0At1g79915unknown proteinC.G.S.X.
0.132e-756Triticum aestivumTa.16917.1.S1_atCD373556--1e-1At4g21903antiporter/ drug transporterC.G.S.X.
0.059e-132Vitis vinifera1622670_s_atCF207059.1hypothetical protein LOC100242012-1e+1At5g05590PAI2 (PHOSPHORIBOSYLANTHRANILATE ISOMERASE 2)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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