Gene omics information

Query gene ID ZmAffx.475.1.A1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8896.7ZmAffx.475.1.A1_atAI677510--2e-1At1g74210glycerophosphoryl diester phosphodiesterase family proteinS.X.H.G.
0.6179.5Zm.13616.1.S1_atAY107497.1--2e+0At4g25315Expressed proteinS.X.H.G.
0.5875.1ZmAffx.976.1.A1_atAI833931--1e-2At4g23880unknown proteinS.X.H.G.
0.5571.6Zm.13940.1.S1_atAI677337hypothetical protein LOC100193246-1e+0At4g0081060S acidic ribosomal protein P1 (RPP1B)S.X.H.G.
0.5571.6Zm.6275.1.S1_a_atAF540907.1benzoxazin6-7e-1At1g066402-oxoglutarate-dependent dioxygenase, putativeS.X.H.G.
0.5469.8Zm.361.1.A1_atAB060130.1response regulator 8-5e-3At3g16857ARR1 (ARABIDOPSIS RESPONSE REGULATOR 1)S.X.H.G.
0.5469.8Zm.15242.1.A1_atBM340075--1e+1At3g16712unknown proteinS.X.H.G.
0.5469.8ZmAffx.89.1.A1_atAI665353hypothetical protein LOC100277768-1e+1At5g20560beta-1,3-glucanase, putativeS.X.H.G.
0.5469.8Zm.13228.1.S1_atCA452580LHT1-5e+0At4g17585unknown proteinS.X.H.G.
0.5369.1ZmAffx.193.1.S1_atAI668444Respiratory burst oxidase-like protein C-3e+0At2g05915unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
41.599.9GSM320470protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
38.999.9GSM320467protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
28.599.7GSM320469protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
20.599.3GSM320468protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
17.699.1GSM320466protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
15.699.0GSM320465protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.098.5GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.498.4GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.098.4GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.698.3GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
1.000807ZmAffx.475.1.S1_atAI677510--2e-1At1g74210glycerophosphoryl diester phosphodiesterase family proteinC.G.S.X.
0.051e+032Zm.9512.1.A1_atBM269465hypothetical protein LOC100274102-9e+0At4g10150zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.021e+032Zm.8884.1.A1_atCF018008hypothetical protein LOC100280133-3e-9At3g48890ATMP2C.G.S.X.
0.035e+030Zm.9340.1.A1_atBM268171--1e+0At1g76540CDKB2C.G.S.X.
0.025e+030Zm.8824.1.A1_atBM347277FK506-binding protein 4-2e-6At3g55520immunophilin, putative / FKBP-type peptidyl-prolyl cis-trans isomerase, putativeC.G.S.X.
0.025e+030Zm.856.1.A1_a_atU82815.1nucleolar histone deacetylase HD2-p39-1e-2At5g22650HD2B (HISTONE DEACETYLASE 2B)C.G.S.X.
0.025e+030Zm.856.1.A1_x_atU82815.1nucleolar histone deacetylase HD2-p39-1e-2At5g22650HD2B (HISTONE DEACETYLASE 2B)C.G.S.X.
0.015e+030Zm.4793.2.A1_atCF049001hypothetical protein LOC100193728-1e-40At1g19880regulator of chromosome condensation (RCC1) family proteinC.G.S.X.
0.015e+030Zm.4793.2.S1_atCF049001Hypothetical protein LOC100193728-1e-40At1g19880regulator of chromosome condensation (RCC1) family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.022e-136Arabidopsis thalianaAt1g74210843761glycerophosphoryl diester phosphodiesterase family proteinF:phosphoric diester hydrolase activity, glycerophosphodiester phosphodiesterase activity;P:glycerol metabolic process, lipid metabolic process;C:vacuole;BOMPFAV---C.G.S.X.
0.041e+034Glycine maxGma.2609.2.A1_atAW311028--3e-9At5g11170ATP binding / ATP-dependent helicase/ helicase/ nucleic acid bindingC.G.S.X.
0.052e+032Hordeum vulgareContig20037_atContig20037--3e+0At3g47630-C.G.S.X.
0.031e-138Oryza sativaOs08g0238600AK066677.1--2e+0At3g23570dienelactone hydrolase family proteinC.G.S.X.
0.054e+032Populus trichocarpaPtpAffx.70153.1.A1_atCV230079--5e-8At1g17820phosphoinositide bindingC.G.S.X.
0.043e+032Triticum aestivumTaAffx.52790.1.S1_atCA701221--4e+0At4g17850-C.G.S.X.
0.042e-134Vitis vinifera1606889_atCA817233--4e+0At1g69210unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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