Gene omics information

Query gene ID ZmAffx.466.1.A1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6785.8ZmAffx.466.1.A1_atAI677405--8e-4At1g52870peroxisomal membrane protein-relatedS.X.H.G.
0.4048.5Zm.3892.10.A1_atAI691846hypothetical protein LOC100273074-1e-19At1g35550elongation factor Tu C-terminal domain-containing proteinS.X.H.G.
0.3336.0Zm.18287.1.A1_atBG517659hypothetical protein LOC100193796-4e-32At5g36700PGLP1 (2-PHOSPHOGLYCOLATE PHOSPHATASE 1)S.X.H.G.
0.3131.6Zm.2540.1.A1_atAY105941.1spermidine synthase-2e-3At1g23820SPDS1 (spermidine synthase 1)S.X.H.G.
0.2928.1Zm.5390.1.A1_atBM078263single-stranded DNA-binding protein-9e+0At5g41992CPuORF58 (Conserved peptide upstream open reading frame 58)S.X.H.G.
0.2724.6Zm.6797.1.A1_atAI396390hypothetical protein LOC100279100-4e+0At3g15270SPL5 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 5)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
46.1100.0GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
44.7100.0GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
39.799.9GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
28.999.7GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
17.999.2GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.598.9GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.498.9GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.798.7GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.998.5GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.597.1GSM320464protocol: Methylation filtration (MF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
1.000765ZmAffx.466.1.S1_atAI677405--8e-4At1g52870peroxisomal membrane protein-relatedC.G.S.X.
0.013e-134Zm.409.1.S1_atU17695.1cell wall invertase1-3e-1At5g39170unknown proteinC.G.S.X.
0.033e-134Zm.19277.1.A1_atCO533311hypothetical protein LOC100273292-2e-3At1g18010-C.G.S.X.
0.043e-134Zm.1663.1.A1_atAW574480VQ motif family protein-3e+0At3g04600tRNA synthetase class I (W and Y) family proteinC.G.S.X.
0.023e-134Zm.13828.1.S1_atAY104425.1--5e-5At1g30040ATGA2OX2 (GIBBERELLIN 2-OXIDASE)C.G.S.X.
0.013e-134Zm.13719.1.A1_atAY106357.1protein kinase APK1A-1e-12At1g07570APK1AC.G.S.X.
0.043e-134Zm.11868.1.A1_atBM381367--1e+0At5g22380anac090 (Arabidopsis NAC domain containing protein 90)C.G.S.X.
0.013e-134Zm.105.1.S1_atM24845.1globulin1-1e+0At5g06710HAT14 (HOMEOBOX FROM ARABIDOPSIS THALIANA)C.G.S.X.
0.033e-134Zm.10128.1.S1_atCA404676--2e+0At2g30760unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.048e-444Arabidopsis thalianaAt1g52870841720peroxisomal membrane protein-relatedF:molecular_function unknown;P:biological_process unknown;C:integral to membrane, chloroplast;MPFO---C.G.S.X.
0.054e-342Glycine maxGmaAffx.9167.1.S1_atBI424404--1e-2At3g59990MAP2B (METHIONINE AMINOPEPTIDASE 2B)C.G.S.X.
0.042e-238Hordeum vulgareContig8282_atContig8282--4e-2At1g72160SEC14 cytosolic factor family protein / phosphoglyceride transfer family proteinC.G.S.X.
0.043e-240Oryza sativaOsAffx.5438.1.S1_at---0C.G.S.X.
0.047e-238Populus trichocarpaPtpAffx.201733.1.S1_atpmrna3449hypothetical protein-4e-3At1g09630ATRAB11C (ARABIDOPSIS RAB GTPASE 11C)C.G.S.X.
0.062e-136Triticum aestivumTaAffx.24874.1.S1_atCA710703--7e+0At3g09940MDHAR (MONODEHYDROASCORBATE REDUCTASE)C.G.S.X.
0.036e-236Vitis vinifera1616212_atCD717201--3e-1At1g01810unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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