CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID ZmAffx.452.1.A1_at

Gene name

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.77 92.1 ZmAffx.452.1.A1_at AI677152 - - 3e-6 At3g03380 DegP7 (DegP protease 7) S.X. H.G.
0.86 96.3 RPTR-Zm-ECOLOXB_x_at RPTR-Zm-ECOLOXB - - 0 S.X. H.G.
0.86 96.3 RPTR-Zm-J01347-3_at RPTR-Zm-J01347-3 - - 0 S.X. H.G.
0.83 95.6 RPTR-Zm-J01347-1_s_at RPTR-Zm-J01347-1 - - 0 S.X. H.G.
0.83 95.6 RPTR-Zm-ECOLOXL_at RPTR-Zm-ECOLOXL - - 0 S.X. H.G.
0.83 95.6 RPTR-Zm-ECOLOXL_x_at RPTR-Zm-ECOLOXL - - 0 S.X. H.G.
0.77 92.1 RPTR-Zm-J01347-1_at RPTR-Zm-J01347-1 - - 0 S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
13.4 98.8 GSM320450 protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.8 98.5 GSM320452 protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.7 98.5 GSM320453 protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.2 98.4 GSM320455 protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.0 98.4 GSM320454 protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.3 98.2 GSM320449 protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.1 98.2 GSM320451 protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.3 98.0 GSM320447 protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.2 98.0 GSM320448 protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.8 95.5 GSM205424 Mo17 19 DAP endosperm tissue biological replicate 2 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
1.00 0 807 ZmAffx.452.1.S1_at AI677152 - - 3e-6 At3g03380 DegP7 (DegP protease 7) C.G. S.X.
0.01 9e-2 36 Zm.3349.1.S1_at AY029315.1 barley mlo defense gene homolog4 - 3e-4 At1g26700 MLO14 (MILDEW RESISTANCE LOCUS O 14) C.G. S.X.
0.04 3e-1 34 Zm.3594.1.A1_at BG873936 - - 1e+0 At1g79180 MYB63 (MYB DOMAIN PROTEIN 63) C.G. S.X.
0.01 1e+0 32 Zm.4034.1.A1_at CF972567 - - 3e-7 At1g55680 WD-40 repeat family protein C.G. S.X.
0.02 1e+0 32 Zm.274.2.S1_at CD988484 - - 6e-14 At1g80950 phospholipid/glycerol acyltransferase family protein C.G. S.X.
0.01 5e+0 30 Zm.6152.1.S1_at AI676863 RING zinc finger protein-like /// small basic membrane intrinsic protein1b - 4e-15 At3g29270 ubiquitin-protein ligase C.G. S.X.
0.01 5e+0 30 Zm.4008.1.A1_at CF624764 - - 3e-44 At1g65540 calcium-binding EF hand family protein C.G. S.X.
0.04 5e+0 30 Zm.3286.1.A1_at BG265986 - - 2e+0 At4g32551 LUG (LEUNIG) C.G. S.X.
0.02 5e+0 30 Zm.2405.1.S1_at AI619081 hypothetical protein LOC100193368 - 2e-25 At1g43130 LCV2 (LIKE COV 2) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.09 3e-6 52 Arabidopsis thaliana At3g03380 821268 DegP7 (DegP protease 7) Encodes a putative DegP protease. - - - C.G. S.X.
0.14 9e-20 97 Glycine max Gma.8288.1.S1_at BU550070 - - 6e-29 At3g03380 DegP7 (DegP protease 7) C.G. S.X.
0.20 1e-78 291 Hordeum vulgare Contig7623_at Contig7623 - - 3e-14 At3g03380 DegP7 (DegP protease 7) C.G. S.X.
0.16 4e-109 395 Oryza sativa Os02g0712000 AK065045.1 - PDZ/DHR/GLGF domain containing protein 1e-10 At3g03380 DegP7 (DegP protease 7) C.G. S.X.
0.17 4e-22 105 Populus trichocarpa PtpAffx.34591.1.S1_s_at CV283632 hypothetical protein - 4e-39 At3g03380 DegP7 (DegP protease 7) C.G. S.X.
0.44 3e-34 145 Triticum aestivum TaAffx.106672.1.S1_at CA713886 - - 3e+0 At4g25700 BETA-OHASE 1 (BETA-HYDROXYLASE 1) C.G. S.X.
0.13 3e-19 93 Vitis vinifera 1610831_at CB976031 hypothetical protein LOC100255257 - 4e-89 At3g03380 DegP7 (DegP protease 7) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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