Gene omics information

Query gene ID ZmAffx.45.1.A1_at
Gene name amino acid permease
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7490.3ZmAffx.45.1.A1_atAI664925amino acid permease-8e-1At5g52160protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinS.X.H.G.
0.5369.1ZmAffx.241.1.S1_atAI670253--3e+0At1g75190unknown proteinS.X.H.G.
0.4861.3Zm.2468.1.S1_atAW120207hypothetical protein LOC100191330-2e+0At4g39190unknown proteinS.X.H.G.
0.4455.7Zm.872.1.A1_atBG320194--3e-23At1g77610glucose-6-phosphate/phosphate translocator-relatedS.X.H.G.
0.2928.1ZmAffx.370.1.A1_atAI673868--3e+0At2g42610LSH10 (LIGHT SENSITIVE HYPOCOTYLS 10)S.X.H.G.
0.2014.2Zm.889.2.S1_atCD439290--4e-20At4g38740ROC1 (ROTAMASE CYP 1)S.X.H.G.
0.1710.6ZmAffx.37.1.S1_atAI657467--5e+0At3g21338unknown proteinS.X.H.G.
0.1710.6ZmAffx.353.1.S1_atAI670540--6e+0Atcg01080-S.X.H.G.
0.158.6ZmAffx.622.1.S1_atAI715050--1e+1At2g44370DC1 domain-containing proteinS.X.H.G.
0.147.7Zm.9142.1.A1_atBM341036--4e-1At3g23170unknown proteinS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
14.898.9GSM290555CCR mutant M1 with array type maize from AffymetrixGSE11531Downregulation of cinnamoyl-coenzyme A reductase in maize (affy_ccr_maize)
11.498.5GSM290553WS1 with array type maize from AffymetrixGSE11531Downregulation of cinnamoyl-coenzyme A reductase in maize (affy_ccr_maize)
10.798.5GSM290556CCR mutant M2 with array type maize from AffymetrixGSE11531Downregulation of cinnamoyl-coenzyme A reductase in maize (affy_ccr_maize)
8.698.1GSM375791Deep-sowing 10d treatment GA3, biological rep1GSE15048Gibberellin-induced gene expression in maize mesocotyl under deep-sowing condition
6.797.6GSM385707Deep-sowing 10d treatment IAA, biological rep1GSE15371Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowing
5.697.1GSM375788Deep-sowing 10d treatment Control, biological rep1GSE15048Gibberellin-induced gene expression in maize mesocotyl under deep-sowing condition
5.296.9GSM385709Deep-sowing 10d treatment TIBA, biological rep1GSE15371Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowing
4.996.7GSM375796Deep-sowing 10d treatment GA3, biological rep2GSE15048Gibberellin-induced gene expression in maize mesocotyl under deep-sowing condition
4.095.8GSM375795Deep-sowing 10d treatment Control, biological rep2GSE15048Gibberellin-induced gene expression in maize mesocotyl under deep-sowing condition
3.695.2GSM323172Zm_SG200Dpep1_24hpi_IIIGSE12892Maize gene expression during infection with Ustilago maydis strain SG200Dpep1
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
1.000807ZmAffx.45.1.S1_atAI664925--8e-1At5g52160protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinC.G.S.X.
0.029e-236Zm.9249.1.A1_atAW438186--2e+0At4g29470phospholipase A2, putativeC.G.S.X.
0.023e-134Zm.5463.1.A1_atAY104268.1prolyl-tRNA synthetase-4e-80At5g52520OVA6 (OVULE ABORTION 6)C.G.S.X.
0.021e+032Zm.6845.1.A1_atBG841671--7e-1At5g63150unknown proteinC.G.S.X.
0.011e+032Zm.6807.1.A1_atCF636721--2e-48At3g554102-oxoglutarate dehydrogenase E1 component, putative / oxoglutarate decarboxylase, putative / alpha-ketoglutaric dehydrogenase, putativeC.G.S.X.
0.011e+032Zm.5168.1.A1_atCD446730hypothetical protein LOC100191535-2e-8At1g06660unknown proteinC.G.S.X.
0.031e+032Zm.16409.1.A1_atCF623827--2e-2At4g22540ORP2A (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 2A)C.G.S.X.
0.021e+032Zm.14039.3.S1_a_atAF113521.1plasminogen activator inhibitor 1 RNA-binding protein-2e-3At4g16830nuclear RNA-binding protein (RGGA)C.G.S.X.
0.011e+032Zm.14039.1.A2_a_atCF003126plasminogen activator inhibitor 1 RNA-binding protein-4e-3At4g16830nuclear RNA-binding protein (RGGA)C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.058e-134Arabidopsis thalianaAt5g52160835292protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:lipid transport;C:endomembrane system;P---C.G.S.X.
0.041e+034Glycine maxGma.18004.1.A1_atBE190655--6e-2At1g32050secretory carrier membrane protein (SCAMP) family proteinC.G.S.X.
0.042e+032Hordeum vulgareContig17882_atContig17882--4e+0Atmg00910-C.G.S.X.
0.162e-1273Oryza sativaOs04g0201500CB679151-Amino acid/polyamine transporter II family protein1e-7At3g54830amino acid transporter family proteinC.G.S.X.
0.047e-238Populus trichocarpaPtpAffx.201995.1.S1_atpmrna3979hypothetical protein-4e+0At4g03240FH (FRATAXIN HOMOLOG)C.G.S.X.
0.062e-136Triticum aestivumTaAffx.56411.1.S1_atCA652244--7e+0At4g21970unknown proteinC.G.S.X.
0.044e+030Vitis vinifera1617495_atCB973304hypothetical protein LOC100264342-5e-3At3g30390amino acid transporter family proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage