Gene omics information

Query gene ID ZmAffx.406.9.A1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7992.8ZmAffx.406.9.A1_atAI670512--1e+1At5g16580BGLU2 (BETA GLUCOSIDASE 2)S.X.H.G.
0.5065.7Zm.15776.1.S1_atBE639950--6e+0At5g46025Ras-related GTP-binding family proteinS.X.H.G.
0.4861.3Zm.17332.1.A1_atCK369960--4e+0At2g29590thioesterase family proteinS.X.H.G.
0.4352.8Zm.17267.1.S1_atCK368940hypothetical protein LOC100275082-5e-1At1g80920J8S.X.H.G.
0.4251.3ZmAffx.900.1.A1_atAI770893--1e+1At5g19480unknown proteinS.X.H.G.
0.4048.5Zm.9508.1.A1_atBM351117--9e-3At5g28040transcription regulatorS.X.H.G.
0.3945.6Zm.2321.6.S1_atBI675076--3e-3At3g28970AAR3 (antiauxin-resistant 3)S.X.H.G.
0.3945.6Zm.9517.1.A1_atBM269495--2e+1Atmg00630-S.X.H.G.
0.3742.3Zm.14590.1.A1_x_atAY110683.1--3e-2At5g50100-S.X.H.G.
0.3336.0ZmAffx.1052.1.S1_atAI881839KH domain containing protein-3e+0At1g75090methyladenine glycosylase family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
66.9100.0GSM320468protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
19.199.2GSM320470protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.998.8GSM320465protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.298.8GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.698.1GSM320467protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.198.0GSM320471protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.897.6GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.697.1GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.996.7GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.896.6GSM320457protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
1.000807ZmAffx.406.9.S1_atAI670512--1e+1At5g16580BGLU2 (BETA GLUCOSIDASE 2)C.G.S.X.
0.015e+030Zm.6804.1.A1_atCA403463hypothetical protein LOC100280289-2e-66At2g34250protein transport protein sec61, putativeC.G.S.X.
0.025e+030Zm.6711.1.A1_atAY104120.1transcription initiation factor IIA gamma chain-4e-29At4g24440transcription initiation factor IIA gamma chain / TFIIA-gamma (TFIIA-S)C.G.S.X.
0.015e+030Zm.4160.1.A1_atCF243936indole-3-acetate beta-glucosyltransferase-1e-2At4g15550IAGLU (INDOLE-3-ACETATE BETA-D-GLUCOSYLTRANSFERASE)C.G.S.X.
0.035e+030Zm.4040.1.A1_atAI834032--5e+0At1g53785unknown proteinC.G.S.X.
0.015e+030Zm.401.1.A1_atAF038586.1pyruvate dehydrogenase kinase isoform 2-1e-11At3g06483PDK (PYRUVATE DEHYDROGENASE KINASE)C.G.S.X.
0.032e+128ZmAffx.424.1.A1_atAI676856--3e+0At5g29807unknown proteinC.G.S.X.
0.032e+128ZmAffx.424.1.S1_atAI676856--3e+0At5g29807unknown proteinC.G.S.X.
0.032e+128ZmAffx.1461.1.S1_at11990232-28ATP synthase epsilon chain-3e-65Atcg00470-C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.021e+130Arabidopsis thalianaAt5g16580831520BGLU2 (BETA GLUCOSIDASE 2)F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:cellular_component unknown;BPMOFA---C.G.S.X.
0.034e+032Glycine maxGma.16462.3.S1_atAW781393--6e-21At1g21760FBP7 (F-BOX PROTEIN 7)C.G.S.X.
0.061e-136Hordeum vulgarerbaal31o06_s_atrbaal31o06--4e-5At5g02500HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)C.G.S.X.
0.036e+032Oryza sativaOs11g01232019639.m00208--3e-1At5g62770unknown proteinC.G.S.X.
0.044e+032Populus trichocarpaPtpAffx.115160.1.A1_atCV230815hypothetical protein-2e+0At5g44345F-box family protein-relatedC.G.S.X.
0.048e-134Triticum aestivumTa.22991.1.A1_atCA721964--4e+0At4g17240unknown proteinC.G.S.X.
0.041e+128Vitis vinifera1613558_atCD801773--3e+0At5g52210ATGB1 (ARABIDOPSIS THALIANA GTP-BINDING PROTEIN 1)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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