Gene omics information

Query gene ID ZmAffx.397.1.S1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9199.0ZmAffx.397.1.S1_atAI676825--3e+0At5g63870PP7 (SERINE/THREONINE PHOSPHATASE 7)S.X.H.G.
0.8094.0Zm.5800.1.S1_atCK394709fiber protein Fb11-1e+0At3g09770zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
0.7389.9Zm.5240.1.S1_a_atCF637178hypothetical protein LOC100272335-1e-70At5g2244060S ribosomal protein L10A (RPL10aC)S.X.H.G.
0.6179.5Zm.6564.1.A1_atAW231699hypothetical protein LOC100272535-2e+0At4g34850chalcone and stilbene synthase family proteinS.X.H.G.
0.4455.7Zm.1373.1.A1_atCF623658wound/stress protein-9e+0At5g37800basic helix-loop-helix (bHLH) family proteinS.X.H.G.
0.4455.7Zm.6904.1.S1_atAY106446.1hypothetical protein LOC100273500-6e-24At5g37020ARF8 (AUXIN RESPONSE FACTOR 8)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
22.799.5GSM320471protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
20.299.3GSM320467protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
18.999.2GSM320466protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
17.499.1GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
16.099.0GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
15.599.0GSM320468protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.498.5GSM320472protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.698.3GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.298.2GSM320461protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.497.8GSM320470protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
1.000801ZmAffx.397.1.A1_atAI676825--3e+0At5g63870PP7 (SERINE/THREONINE PHOSPHATASE 7)C.G.S.X.
0.013e-134Zm.3978.1.A1_atBQ538157--3e-17At1g70320UPL2 (UBIQUITIN-PROTEIN LIGASE 2)C.G.S.X.
0.013e-134Zm.3978.1.A1_a_atBQ538157--3e-17At1g70320UPL2 (UBIQUITIN-PROTEIN LIGASE 2)C.G.S.X.
0.021e+032Zm.13184.1.S1_atCA409097--2e-1At2g20620unknown proteinC.G.S.X.
0.011e+032Zm.12595.1.S1_atBG266819--1e-7At1g09620ATP binding / aminoacyl-tRNA ligase/ leucine-tRNA ligase/ nucleotide bindingC.G.S.X.
0.045e+030ZmAffx.1048.1.A1_atAI881798--2e-1At2g41100TCH3 (TOUCH 3)C.G.S.X.
0.045e+030ZmAffx.1048.1.S1_atAI881798--2e-1At2g41100TCH3 (TOUCH 3)C.G.S.X.
0.025e+030Zm.5953.1.A1_atBM334343hypothetical protein LOC100280427-2e+0At5g65130AP2 domain-containing transcription factor, putativeC.G.S.X.
0.035e+030Zm.5904.1.A1_atAW091094hypothetical protein LOC100278561-2e-5At2g21600ATRER1BC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.033e+032Arabidopsis thalianaAt5g63870836507PP7 (SERINE/THREONINE PHOSPHATASE 7)Encodes a nuclear localized serine/threonine phosphatase that appears to be regulated by redox activity and is a positive regulator of cryptochrome mediated blue light signalling.---C.G.S.X.
0.041e+034Glycine maxPsAffx.C3000180_atPsAffx.C3000180--1e-3At2g47950unknown proteinC.G.S.X.
0.042e+032Hordeum vulgareHW09I06u_atHW09I06u--1e-2At2g28090heavy-metal-associated domain-containing proteinC.G.S.X.
0.042e+034Oryza sativaOsAffx.7146.1.S1_at---0C.G.S.X.
0.052e-240Populus trichocarpaPtpAffx.214242.1.S1_atpmrna27706hypothetical protein-4e+0At5g47180vesicle-associated membrane family protein / VAMP family proteinC.G.S.X.
0.041e+130Triticum aestivumTaAffx.26389.1.S1_atCA689339--3e+0Atcg00330-C.G.S.X.
0.042e-134Vitis vinifera1609023_atCB974793--1e+0At3g57040ARR9 (RESPONSE REGULATOR 9)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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