Gene omics information

Query gene ID	ZmAffx.372.1.A1_at
Gene name	anther-specific protein SF18
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.44	55.7	ZmAffx.372.1.A1_at	AI673888	anther-specific protein SF18	-	8e-1	At3g59680	unknown protein	S.X.	H.G.	Please select
0.33	36.0	Zm.2768.1.A1_at	AW067159	Hypothetical protein LOC100193535	-	1e+0	At5g04760	myb family transcription factor	S.X.	H.G.	Please select
0.31	31.6	Zm.17361.1.S1_at	CK370908	-	-	5e-19	At3g55320	PGP20 (P-GLYCOPROTEIN 20)	S.X.	H.G.	Please select
0.17	10.6	Zm.4017.2.S1_at	CD052379	-	-	1e-19	At3g57870	SCE1 (SUMO CONJUGATION ENZYME 1)	S.X.	H.G.	Please select
0.13	6.8	Zm.18988.1.A1_at	CO525114	pollen-specific kinase partner protein	-	1e-4	At4g38430	ROPGEF1	S.X.	H.G.	Please select
0.13	6.8	Zm.11692.1.A1_at	BM379959	-	-	4e+0	At3g42155	catalytic/ hydrolase, hydrolyzing O-glycosyl compounds	S.X.	H.G.	Please select
0.04	1.5	Zm.12977.2.S1_at	AI677017	Hypothetical protein LOC100193319	-	5e-5	At1g15370	-	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
10.6	98.4	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.3	98.4	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.8	98.3	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.8	98.1	GSM206308	Lower pulvinus 15 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
7.8	97.9	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.5	97.8	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.3	97.8	GSM162266	Wild type 2 with array type maize from Affymetrix	GSE7030	Phenotypic and molecular characterisation of a novel Bt2 allele in maize
7.1	97.7	GSM162264	Mutant 2 with array type maize from Affymetrix	GSE7030	Phenotypic and molecular characterisation of a novel Bt2 allele in maize
6.7	97.6	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.1	97.4	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.49	5e-111	398	ZmAffx.372.1.S1_at	AI673888	-	-	8e-1	At3g59680	unknown protein	C.G.	S.X.	Please select
0.05	1e-3	42	ZmAffx.673.1.A1_at	AI691345	alpha-expansin 20	-	1e-2	At3g55500	ATEXPA16 (ARABIDOPSIS THALIANA EXPANSIN A16)	C.G.	S.X.	Please select
0.03	1e-3	42	Zm.13670.1.A1_at	AY107037.1	hypothetical protein LOC100276497	-	3e-3	At5g34930	arogenate dehydrogenase	C.G.	S.X.	Please select
0.04	5e-3	40	Zm.4703.1.A1_at	BM079272	hypothetical protein LOC100279234	-	2e+1	At5g41860	unknown protein	C.G.	S.X.	Please select
0.04	2e-2	38	Zm.14703.2.A1_a_at	CF634914	hypothetical protein LOC100194060	-	3e-7	At5g66650	unknown protein	C.G.	S.X.	Please select
0.02	9e-2	36	Zm.705.1.S1_at	BG842406	-	-	4e-2	At1g04445	zinc finger (C2H2 type) family protein	C.G.	S.X.	Please select
0.03	3e-1	34	Zm.7734.1.A1_at	BM334368	hypothetical protein LOC100193498	-	3e-5	At5g26170	WRKY50	C.G.	S.X.	Please select
0.04	3e-1	34	Zm.657.1.S1_s_at	AF365951.1	early light-inducible protein ELIP	-	3e-5	At4g14690	ELIP2 (EARLY LIGHT-INDUCIBLE PROTEIN 2)	C.G.	S.X.	Please select
0.03	3e-1	34	Zm.6349.1.A1_at	CA830981	hypothetical protein LOC100277279	-	1e-7	At1g46264	AT-HSFB4	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	8e-1	34	Arabidopsis thaliana	At3g59680	825137	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	7e-2	38	Glycine max	PsAffx.CL1071Contig1_at	PsAffx.CL1071Contig1	-	-	9e+0	At5g15960	KIN1	C.G.	S.X.	Please select
0.08	5e-25	113	Hordeum vulgare	Contig9629_at	Contig9629	-	-	6e-1	At4g18620	-	C.G.	S.X.	Please select
0.12	3e-20	99	Oryza sativa	Os.40421.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.05	7e-2	38	Populus trichocarpa	PtpAffx.30740.1.A1_s_at	CV259013	hypothetical protein	-	2e-2	At1g79110	protein binding / zinc ion binding	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.07	3e-16	85	Triticum aestivum	Ta.16194.1.S1_x_at	CK193578	-	-	8e+0	At4g14540	NF-YB3 (NUCLEAR FACTOR Y, SUBUNIT B3)	C.G.	S.X.	Please select
0.04	9e-1	32	Vitis vinifera	1611573_at	CA814281	similar to KEA1 (K EFFLUX ANTIPORTER 1); potassium:hydrogen antiporter	-	1e-18	At1g01790	KEA1 (K EFFLUX ANTIPORTER 1)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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