Gene omics information

Query gene ID	ZmAffx.361.1.A1_at
Gene name
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.87	96.4	ZmAffx.361.1.A1_at	AI670571	-	-	8e-1	At1g15800	unknown protein	S.X.	H.G.	Please select
0.63	81.1	Zm.13913.1.S1_s_at	AF073332.1	ROA protein 1 /// replication origin activator 2 /// replication origin activator 4	-	8e-11	At5g46280	DNA replication licensing factor, putative	S.X.	H.G.	Please select
0.61	79.5	Zm.762.1.A1_a_at	BG349623	-	-	1e-4	At3g05740	RECQI1 (Arabidopsis RecQ helicase l1)	S.X.	H.G.	Please select
0.55	71.6	ZmAffx.338.1.S1_at	AI670525	-	-	3e+0	At4g12460	ORP2B (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 2B)	S.X.	H.G.	Please select
0.55	71.6	Zm.9130.1.A1_at	BM268570	-	-	7e-2	At3g62220	serine/threonine protein kinase, putative	S.X.	H.G.	Please select
0.52	67.3	ZmAffx.29.1.S1_at	AI657322	-	-	2e-1	At1g65445	transferase-related	S.X.	H.G.	Please select
0.50	65.7	ZmAffx.309.1.S1_at	AI670442	-	-	1e+1	At5g56150	UBC30 (ubiquitin-conjugating enzyme 30)	S.X.	H.G.	Please select
0.48	61.3	ZmAffx.426.1.A1_at	AI676860	-	-	5e-2	At5g43210	endo/excinuclease amino terminal domain-containing protein	S.X.	H.G.	Please select
0.47	59.9	ZmAffx.675.1.A1_at	AI734494	-	-	3e+0	At4g24700	unknown protein	S.X.	H.G.	Please select
0.46	58.4	ZmAffx.265.1.A1_at	AI670393	-	-	3e+0	At3g45770	oxidoreductase, zinc-binding dehydrogenase family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
40.0	99.9	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
38.9	99.9	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
37.1	99.9	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
22.0	99.4	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
20.0	99.3	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
18.3	99.2	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.8	98.8	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.8	98.7	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.8	97.9	GSM320456	protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.6	97.9	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
1.00	0	807	ZmAffx.361.1.S1_at	AI670571	-	-	8e-1	At1g15800	unknown protein	C.G.	S.X.	Please select
0.02	3e-1	34	Zm.372.1.S1_at	AF058757.1	indeterminate growth1	-	9e-7	At1g14580	zinc finger (C2H2 type) family protein	C.G.	S.X.	Please select
0.01	3e-1	34	Zm.16907.2.S1_at	CK371534	-	-	1e+0	At5g44130	FLA13 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 13 PRECURSOR)	C.G.	S.X.	Please select
0.03	1e+0	32	Zm.7578.1.A1_at	BM079026	-	-	9e-2	At4g30460	glycine-rich protein	C.G.	S.X.	Please select
0.04	1e+0	32	Zm.704.1.S1_at	U15781.1	xyloglucan endotransglycosylase homolog1	-	3e-6	At5g57550	XTR3 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 3)	C.G.	S.X.	Please select
0.03	1e+0	32	Zm.17635.1.A1_at	CK367936	-	-	1e+0	At2g20260	PSAE-2 (photosystem I subunit E-2)	C.G.	S.X.	Please select
0.03	1e+0	32	Zm.17635.1.A1_s_at	CK367936	hypothetical protein LOC100277566	-	1e+0	At2g20260	PSAE-2 (photosystem I subunit E-2)	C.G.	S.X.	Please select
0.01	1e+0	32	Zm.14342.1.S1_at	CA399127	-	-	2e-24	At1g53050	protein kinase family protein	C.G.	S.X.	Please select
0.04	5e+0	30	ZmAffx.597.1.A1_at	AI715025	-	-	8e-1	At1g43260	-	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	8e-1	34	Arabidopsis thaliana	At1g15800	838149	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.06	4e+0	32	Glycine max	PsAffx.psZS014xD11f_s_at	PsAffx.psZS014xD11f	-	-	3e+0	At5g08335	ATSTE14B	C.G.	S.X.	Please select
0.03	2e+0	32	Hordeum vulgare	Contig12361_at	Contig12361	-	-	5e+0	At4g30660	hydrophobic protein, putative / low temperature and salt responsive protein, putative	C.G.	S.X.	Please select
0.05	2e+0	34	Oryza sativa	OsAffx.20964.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	4e+0	32	Populus trichocarpa	PtpAffx.86770.1.S1_at	CA821831	hypothetical protein	-	7e-1	At4g05340	ATP binding	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	8e-1	34	Triticum aestivum	TaAffx.26007.1.S1_at	CA693241	-	-	8e-1	At1g51823	unknown protein	C.G.	S.X.	Please select
0.05	4e+0	30	Vitis vinifera	1615335_s_at	CF205989.1	hypothetical protein LOC100241327	-	2e+0	At4g15760	MO1 (MONOOXYGENASE 1)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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