Gene omics information

Query gene ID ZmAffx.300.1.A1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9399.3ZmAffx.300.1.A1_atAI670433--8e-1At2g44735-S.X.H.G.
0.6886.1ZmAffx.249.1.A1_atAI670263--3e+0At1g48020PMEI1 (PECTIN METHYLESTERASE INHIBITOR 1)S.X.H.G.
0.5369.1Zm.9763.1.A1_atBM338608--1e+0At3g10590myb family transcription factorS.X.H.G.
0.5166.4ZmAffx.434.1.A1_atAI676950gpm2 protein-2e-1At3g01790ribosomal protein L13 family proteinS.X.H.G.
0.5065.7ZmAffx.347.1.A1_atAI670534--1e+1At4g01995unknown proteinS.X.H.G.
0.4961.9Zm.1116.1.S1_atAY109800.1--2e+0At1g03180unknown proteinS.X.H.G.
0.4759.9Zm.622.1.S1_atAF342809.1tonoplast membrane integral protein ZmTIP3-2-4e-2At2g01340unknown proteinS.X.H.G.
0.4759.9Zm.18072.1.A1_atCF626927guanine nucleotide-binding protein beta subunit-like protein 1-6e-1At4g29860EMB2757 (EMBRYO DEFECTIVE 2757)S.X.H.G.
0.4556.4ZmAffx.314.1.A1_atAI670496--3e+0At3g45960ATEXLA3 (arabidopsis thaliana expansin-like a3)S.X.H.G.
0.4455.7ZmAffx.19.1.A1_atAI586648PWWP domain containing protein-1e+1At1g48745unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
10.598.4GSM253256ZM_2d_Mock_3inf_IGSE10023Maize gene expression during infection with Ustilago maydis
8.798.1GSM320469protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.198.0GSM202413Zmet2 study 11-day seedling aerial tissue genotype B73 zmet2-m1 Rep2GSE8188Expression profiling of zmet2-m1 mutants relative to wild-type
5.497.0GSM253246ZM_12h_Mock_3inf_IIIGSE10023Maize gene expression during infection with Ustilago maydis
4.896.6GSM206287Left pulvinus control total RNA biorep 1GSE8320Transcriptional and translational gene regulation in the maize pulvinus
4.696.4GSM253257ZM_2d_Mock_3inf_IIGSE10023Maize gene expression during infection with Ustilago maydis
4.596.3GSM253278ZM_8d_SG200_3inf_IIGSE10023Maize gene expression during infection with Ustilago maydis
4.095.8GSM202404Zmet2 study 11-day seedling aerial tissue genotype B73 Rep5GSE8188Expression profiling of zmet2-m1 mutants relative to wild-type
3.595.1GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.494.9GSM253259ZM_2d_SG200_3inf_IGSE10023Maize gene expression during infection with Ustilago maydis
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
1.000807ZmAffx.300.1.S1_atAI670433--8e-1At2g44735-C.G.S.X.
0.029e-236Zm.18369.1.S1_atBQ618986hypothetical protein LOC100193825 /// PCO071075 protein-9e-1At3g53000AtPP2-A15 (Phloem protein 2-A15)C.G.S.X.
0.043e-134Zm.4153.1.A1_atAY105302.1hydrophobic protein LTI6B-7e-2At3g05890RCI2B (RARE-COLD-INDUCIBLE 2B)C.G.S.X.
0.021e+032Zm.6489.1.A1_atAI692084--7e-7At5g58787zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.031e+032Zm.18490.1.A1_atCO529325uridylate kinase-2e+0At5g43700ATAUX2-11 (AUXIN INDUCIBLE 2-11)C.G.S.X.
0.041e+032Zm.11677.1.A1_s_atCK371543RTCN-4e+0At5g11425unknown proteinC.G.S.X.
0.041e+032Zm.11677.1.A1_atCK371543RTCN-4e+0At5g11425unknown proteinC.G.S.X.
0.045e+030ZmAffx.623.1.A1_atAI715051--5e-2At4g36900RAP2.10 (related to AP2 10)C.G.S.X.
0.045e+030ZmAffx.623.1.S1_atAI715051--5e-2At4g36900RAP2.10 (related to AP2 10)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.038e-134Arabidopsis thalianaAt2g44735819081-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PM---C.G.S.X.
0.031e+034Glycine maxGmaAffx.90960.1.S1_atCF806685--4e-16At4g23130CRK5 (CYSTEINE-RICH RLK5)C.G.S.X.
0.042e+032Hordeum vulgareHVSMEc0013C11r2_atHVSMEc0013C11r2--7e-2At2g05600-C.G.S.X.
0.056e+032Oryza sativaOs10g04414669638.m02620--2e+0At1g60040AGL49 (AGAMOUS-LIKE 49)C.G.S.X.
0.041e+034Populus trichocarpaPtpAffx.216766.1.S1_atpmrna31752hypothetical protein-1e+0At5g44340TUB4C.G.S.X.
0.063e+032Triticum aestivumTaAffx.6520.1.S1_atCA684026--7e+0At2g14860peroxisomal membrane protein 22 kDa, putativeC.G.S.X.
0.044e+030Vitis vinifera1606628_atCD801290hypothetical protein LOC100262458-9e-13At1g76090SMT3 (STEROL METHYLTRANSFERASE 3)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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