Gene omics information

Query gene ID ZmAffx.229.1.A1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9199.0ZmAffx.229.1.A1_atAI670241--5e-2At3g58190LBD29 (LATERAL ORGAN BOUNDARIES-DOMAIN 29)S.X.H.G.
0.9199.0Zm.12584.1.A1_atAF533364.1water-stress protein-2e-5At2g44710RNA recognition motif (RRM)-containing proteinS.X.H.G.
0.9199.0Zm.12584.3.A1_a_atCA405318--1e+0At3g54363unknown proteinS.X.H.G.
0.9199.0ZmAffx.143.1.S1_atAI667791--5e+0At5g23480DNA bindingS.X.H.G.
0.8094.0Zm.2297.1.A1_atAW352507hypothetical protein LOC100192643-4e-1At3g06750hydroxyproline-rich glycoprotein family proteinS.X.H.G.
0.7792.1ZmAffx.1006.1.A1_atAI881370--3e+0At4g34470ASK12 (ARABIDOPSIS SKP1-LIKE 12)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
53.1100.0GSM320473protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
18.799.2GSM320467protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.998.2GSM320466protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.998.2GSM320471protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.597.5GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.297.4GSM320438protocol: mRNA - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.896.6GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.296.0GSM253249ZM_12h_SG200_3inf_IIGSE10023Maize gene expression during infection with Ustilago maydis
4.195.9GSM202400Zmet2 study 11-day seedling aerial tissue genotype B73 Rep4GSE8188Expression profiling of zmet2-m1 mutants relative to wild-type
3.895.5GSM202401Zmet2 study 11-day seedling aerial tissue genotype B73 zmet2-m1 Rep4GSE8188Expression profiling of zmet2-m1 mutants relative to wild-type
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.950722ZmAffx.229.1.S1_atAI670241--5e-2At3g58190LBD29 (LATERAL ORGAN BOUNDARIES-DOMAIN 29)C.G.S.X.
0.012e-238Zm.4273.1.A1_atCF626426hypothetical protein LOC100217188-6e-15At1g79930HSP91C.G.S.X.
0.033e-134Zm.3694.1.A1_atCF627007pollen ankyrin-like protein-2e+0At1g19120small nuclear ribonucleoprotein, putative / snRNP, putative / Sm protein, putativeC.G.S.X.
0.023e-134Zm.1464.1.S1_atBM276908--2e+0At3g59370unknown proteinC.G.S.X.
0.031e+032Zm.9919.1.A1_atCO517763hypothetical protein LOC100217041-2e+0At4g36720HVA22K (HVA22-LIKE PROTEIN K)C.G.S.X.
0.011e+032Zm.5300.1.A1_atAI734564--5e-9At5g01020protein kinase family proteinC.G.S.X.
0.011e+032Zm.13944.1.A1_atAF332181.1beta-expansin 8-5e-2At5g55650unknown proteinC.G.S.X.
0.021e+032Zm.13143.1.A1_atAY105306.1hypothetical protein LOC100191497-6e-1At3g24100-C.G.S.X.
0.045e+030ZmAffx.1527.1.S1_at40794996-123--8e-1At3g13710PRA1.F4 (PRENYLATED RAB ACCEPTOR 1.F4)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.045e-238Arabidopsis thalianaAt3g58190824988LBD29 (LATERAL ORGAN BOUNDARIES-DOMAIN 29)This gene contains two auxin-responsive element (AuxRE).---C.G.S.X.
0.051e+034Glycine maxHgAffx.14569.1.S1_atCB299571--2e+0At4g08039-C.G.S.X.
0.036e+030Hordeum vulgareContig13590_atContig13590--2e-2At2g31070TCP10 (TCP DOMAIN PROTEIN 10)C.G.S.X.
0.084e-136Oryza sativaOsAffx.8726.1.S1_at---0C.G.S.X.
0.063e-136Populus trichocarpaPtp.3447.1.A1_atDN492951--2e+0At3g06000leucine-rich repeat family proteinC.G.S.X.
0.048e-134Triticum aestivumTa.12253.1.A1_atBQ171951--3e+0At4g03945enzyme inhibitor/ pectinesteraseC.G.S.X.
0.059e-132Vitis vinifera1606918_atBQ797509hypothetical protein LOC100250187-3e-1At5g57000unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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