Gene omics information

Query gene ID ZmAffx.228.1.A1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.4048.5ZmAffx.228.1.A1_atAI670240--5e-2At5g59000zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
0.8395.6Zm.4299.1.S1_atCF046651hypothetical protein LOC100279924-5e-14At3g21630CERK1 (CHITIN ELICITOR RECEPTOR KINASE 1)S.X.H.G.
0.6077.8Zm.6559.1.A1_atCF051688--3e-14At5g26830threonyl-tRNA synthetase / threonine--tRNA ligase (THRRS)S.X.H.G.
0.5065.7Zm.19021.1.A1_atCO531319virulence-related protein Nf314-9e-7At2g35780scpl26 (serine carboxypeptidase-like 26)S.X.H.G.
0.4048.5Zm.6376.1.A1_atAY106982.1--2e-1At1g68560XYL1 (ALPHA-XYLOSIDASE 1)S.X.H.G.
0.3641.3Zm.13412.1.S1_x_atCF630246--2e-7At2g36230APG10 (ALBINO AND PALE GREEN 10)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
17.999.2GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
17.599.1GSM320465protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
15.499.0GSM320472protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
15.398.9GSM320469protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.798.9GSM320468protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.598.4GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.398.4GSM320466protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.198.2GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.898.1GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.598.1GSM320471protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
1.000807ZmAffx.228.1.S1_atAI670240--5e-2At5g59000zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.029e-546Zm.6594.1.A1_atCF972362hypothetical protein LOC100193029-1e-3At5g23950C2 domain-containing proteinC.G.S.X.
0.014e-444Zm.520.1.S1_x_atAF200528.1cellulose synthase-4-2e-74At5g05170CEV1 (CONSTITUTIVE EXPRESSION OF VSP 1)C.G.S.X.
0.014e-444Zm.520.1.S1_atAF200528.1cellulose synthase-4-2e-74At5g05170CEV1 (CONSTITUTIVE EXPRESSION OF VSP 1)C.G.S.X.
0.024e-444Zm.16926.1.S1_atCO522465--2e-1At1g29460auxin-responsive protein, putativeC.G.S.X.
0.049e-236Zm.17703.1.A1_atCK369722--5e-3At5g23950C2 domain-containing proteinC.G.S.X.
0.049e-236Zm.17357.1.S1_atCK370769--5e+0At1g29195unknown proteinC.G.S.X.
0.023e-134Zm.8950.1.S1_atCO530781soluble inorganic pyrophosphatase-1e-11At3g53620AtPPa4 (Arabidopsis thaliana pyrophosphorylase 4)C.G.S.X.
0.023e-134Zm.8950.1.A1_atAY109015.1--1e-17At2g18230AtPPa2 (Arabidopsis thaliana pyrophosphorylase 2)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.055e-238Arabidopsis thalianaAt5g59000836017zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:biological_process unknown;C:cellular_component unknown;MOFPVBA---C.G.S.X.
0.077e-238Glycine maxGmaAffx.51039.2.S1_atBM521845--3e+0At4g19480unknown proteinC.G.S.X.
0.064e-134Hordeum vulgareContig3787_atContig3787--6e+0At3g32160unknown proteinC.G.S.X.
0.051e-138Oryza sativaOsAffx.28727.1.S1_at---0C.G.S.X.
0.057e-238Populus trichocarpaPtpAffx.11483.2.A1_atCK106946hypothetical protein-7e-2At2g21790RNR1 (RIBONUCLEOTIDE REDUCTASE 1)C.G.S.X.
0.078e-134Triticum aestivumTaAffx.86601.1.S1_x_atCA604778--2e+0At5g47740-C.G.S.X.
0.051e-342Vitis vinifera1616417_atCB975222hypothetical protein LOC100257171-2e-2At4g21610LOL2 (LSD ONE LIKE 2)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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