CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID ZmAffx.183.1.A1_at

Gene name

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.80 94.0 ZmAffx.183.1.A1_at AI668346 - - 3e+0 At5g57510 unknown protein S.X. H.G.
0.80 94.0 ZmAffx.172.1.S1_at AI668238 - - 3e+0 Atmg00240 - S.X. H.G.
0.77 92.1 ZmAffx.15.1.S1_at AI491598 - - 7e+0 At5g09370 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein S.X. H.G.
0.73 89.9 ZmAffx.173.1.A1_at AI668250 - - 1e+1 At5g38060 unknown protein S.X. H.G.
0.40 48.5 ZmAffx.1457.1.S1_at 11990232-24 - - 1e-83 Atcg00380 - S.X. H.G.
0.16 9.4 ZmAffx.1134.1.A1_at AW331087 - - 8e-1 At4g10270 wound-responsive family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
24.0 99.5 GSM320455 protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
18.6 99.2 GSM320450 protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
16.1 99.0 GSM320454 protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
16.0 99.0 GSM320453 protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.3 98.9 GSM320452 protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.6 98.8 GSM320451 protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.4 98.8 GSM320448 protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.7 98.1 GSM320449 protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.8 97.2 GSM320447 protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.8 95.5 GSM320459 protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep1 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
1.00 0 807 ZmAffx.183.1.S1_at AI668346 - - 3e+0 At5g57510 unknown protein C.G. S.X.
0.01 3e-1 34 Zm.687.2.S1_at AI001320 hypothetical protein LOC100279992 - 8e-36 At2g04030 CR88 C.G. S.X.
0.01 3e-1 34 Zm.687.2.A1_at AY106328.1 - - 8e-36 At2g04030 CR88 C.G. S.X.
0.02 1e+0 32 Zm.18072.1.A1_at CF626927 guanine nucleotide-binding protein beta subunit-like protein 1 - 6e-1 At4g29860 EMB2757 (EMBRYO DEFECTIVE 2757) C.G. S.X.
0.01 5e+0 30 ZmAffx.1305.1.S1_s_at 11990232-73 - - 0 Atcg01250 - C.G. S.X.
0.04 5e+0 30 Zm.5971.1.A1_at AI665982 - - 1e+1 At5g47320 RPS19 (RIBOSOMAL PROTEIN S19) C.G. S.X.
0.01 5e+0 30 Zm.4251.1.S1_at CF625068 Protein disulfide isomerase - 1e-12 At1g04980 ATPDIL2-2 (PDI-LIKE 2-2) C.G. S.X.
0.03 5e+0 30 Zm.373.2.S1_a_at CF040015 false DAD1 - 2e-21 At2g35520 DAD2 (DEFENDER AGAINST CELL DEATH 2) C.G. S.X.
0.01 5e+0 30 Zm.3100.1.A1_at CF043630 asparaginyl-tRNA synthetase, cytoplasmic 3 - 2e-27 At1g70980 SYNC3 C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 3e+0 32 Arabidopsis thaliana At5g57510 835855 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P - - - C.G. S.X.
0.04 7e-2 38 Glycine max Gma.15426.1.A1_at BG839445 - - 1e+0 At1g47580 lipoyltransferase, putative C.G. S.X.
0.07 6e+0 30 Hordeum vulgare HM11M18r_at HM11M18r - - 9e-1 At2g27160 unknown protein C.G. S.X.
0.13 3e-26 119 Oryza sativa Os07g0477500 AK066181.1 - Conserved hypothetical protein 2e-15 At5g08450 - C.G. S.X.
0.05 1e+0 34 Populus trichocarpa PtpAffx.202965.1.S1_at pmrna5869 hypothetical protein - 1e+1 At5g16486 - C.G. S.X.
0.05 3e+0 32 Triticum aestivum TaAffx.24319.1.S1_at CA721058 - - 2e-1 At1g15690 AVP1 C.G. S.X.
0.04 2e-1 34 Vitis vinifera 1615280_at CB968942 - - 1e-3 At3g48880 F-box family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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