Gene omics information

Query gene ID ZmAffx.170.1.S1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9199.0ZmAffx.170.1.S1_atAI668224--8e-1At1g13245RTFL17 (ROTUNDIFOLIA LIKE 17)S.X.H.G.
0.9199.0ZmAffx.168.1.S1_atAI668216--2e-1At3g24250glycine-rich proteinS.X.H.G.
0.7389.9ZmAffx.17.1.A1_atAI491699--1e+1At2g16535-S.X.H.G.
0.6381.1ZmAffx.169.1.S1_atAI664986--2e-1At2g24765ARF3 (ADP-RIBOSYLATION FACTOR 3)S.X.H.G.
0.5065.7ZmAffx.166.1.S1_atAI668207--1e+1At5g57370unknown proteinS.X.H.G.
0.3437.2ZmAffx.171.1.S1_atAI668231Hypothetical protein LOC100192595-3e+0At1g51160synbindin, putativeS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
35.999.9GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
28.599.7GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
28.399.7GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
26.299.7GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
25.399.6GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
22.799.5GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
20.499.3GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
18.199.2GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
16.699.1GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.995.7GSM320461protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.714e-164575ZmAffx.170.1.A1_atAI668224violaxanthin de-epoxidase-8e-1At1g13245RTFL17 (ROTUNDIFOLIA LIKE 17)C.G.S.X.
0.023e-134Zm.5798.1.A1_atBM072971heat shock protein binding protein-2e-3At3g13310DNAJ heat shock N-terminal domain-containing proteinC.G.S.X.
0.023e-134Zm.3371.1.A1_atBM080684--5e-2At4g35150O-methyltransferase family 2 proteinC.G.S.X.
0.023e-134Zm.16195.1.A1_atBM080827--7e-1At3g60270uclacyanin, putativeC.G.S.X.
0.011e+032Zm.419.1.S1_atAF045473.1histone deacetylase-8e-26At5g63110HDA6 (HISTONE DEACETYLASE 6)C.G.S.X.
0.011e+032Zm.18247.1.A1_atAY110411.1--2e-30At4g17190FPS2 (FARNESYL DIPHOSPHATE SYNTHASE 2)C.G.S.X.
0.011e+032Zm.18247.1.S1_atAY110411.1Hypothetical protein LOC100192004-2e-30At4g17190FPS2 (FARNESYL DIPHOSPHATE SYNTHASE 2)C.G.S.X.
0.021e+032Zm.14406.1.S1_atBE051027hypothetical protein LOC100191663-4e-3At4g00830RNA recognition motif (RRM)-containing proteinC.G.S.X.
0.015e+030Zm.8228.1.S1_atBM073359hypothetical protein LOC100193261-3e-16At5g489605' nucleotidase family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.068e-134Arabidopsis thalianaAt1g13245837884RTFL17 (ROTUNDIFOLIA LIKE 17)F:molecular_function unknown;P:shoot development;C:unknown;P---C.G.S.X.
0.041e+034Glycine maxGmaAffx.74198.1.S1_atBQ628091--2e-1At1g63200-C.G.S.X.
0.137e-1579Hordeum vulgareContig7913_atContig7913--1e-21At1g08550NPQ1 (NON-PHOTOCHEMICAL QUENCHING 1)C.G.S.X.
0.112e-34147Oryza sativaOs04g0379700AF288196.3-Violaxanthin de-epoxidase precursor7e-17At1g08550NPQ1 (NON-PHOTOCHEMICAL QUENCHING 1)C.G.S.X.
0.033e-136Populus trichocarpaPtpAffx.200320.1.S1_atpmrna636hypothetical protein-1e-16At1g31320LBD4 (LOB DOMAIN-CONTAINING PROTEIN 4)C.G.S.X.
0.141e-1583Triticum aestivumTa.275.1.S1_atAF265294.1--2e-26At1g08550NPQ1 (NON-PHOTOCHEMICAL QUENCHING 1)C.G.S.X.
0.044e+030Vitis vinifera1617523_atCF209489hypothetical protein LOC100245822-4e+0At4g13690unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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