Gene omics information

Query gene ID ZmAffx.1538.1.S1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9199.0ZmAffx.1538.1.S1_at40794996-128--3e+0At3g21730dihydroneopterin aldolase family proteinS.X.H.G.
0.9199.0ZmAffx.1501.1.S1_at40794996-118--8e-1At5g12300C2 domain-containing proteinS.X.H.G.
0.8395.6ZmAffx.1486.1.S1_at11990232-43--3e-56Atcg00650-S.X.H.G.
0.8395.6ZmAffx.1143.1.S1_atAW399931--8e+0At5g01340mitochondrial substrate carrier family proteinS.X.H.G.
0.8395.6ZmAffx.1480.1.S1_at40794996-107--1e+1At5g1520040S ribosomal protein S9 (RPS9B)S.X.H.G.
0.8395.6ZmAffx.1357.1.S1_at40794996-46--2e-1At1g26921unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
20.999.4GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
20.099.3GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
19.999.3GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
18.699.2GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
15.999.0GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
15.499.0GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
15.499.0GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.998.9GSM320460protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.898.9GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.898.9GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.011e+032Zm.3902.1.A1_atAW062054--1e+0At5g55570unknown proteinC.G.S.X.
0.011e+032Zm.3902.1.S1_atAY106289.1--1e+0At5g55570unknown proteinC.G.S.X.
0.021e+032Zm.17915.1.A1_atCF038577--7e-103Atmg00830-C.G.S.X.
0.021e+032Zm.16983.1.A1_atAY107293.1--2e+0At3g14670unknown proteinC.G.S.X.
0.034e+030Zm.8859.1.A1_atBM340085--5e+0At2g37240-C.G.S.X.
0.014e+030Zm.4981.1.A1_atCK826720--3e-3At3g18610ATRANGAP1 (RAN GTPASE-ACTIVATING PROTEIN 1)C.G.S.X.
0.024e+030Zm.4045.1.S1_atBE5187796-phosphogluconolactonase-3e+0At1g13700glucosamine/galactosamine-6-phosphate isomerase family proteinC.G.S.X.
0.024e+030Zm.2288.1.S1_atCB329565hypothetical protein LOC100272544-7e-1At2g34750RNA polymerase I specific transcription initiation factor RRN3 family proteinC.G.S.X.
0.024e+030Zm.15852.2.S1_a_atAY108720.1--1e-41At5g03430phosphoadenosine phosphosulfate (PAPS) reductase family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.043e+032Arabidopsis thalianaAt3g21730821727dihydroneopterin aldolase family proteinF:dihydroneopterin aldolase activity;P:folic acid and derivative metabolic process;C:endomembrane system;BOPA---C.G.S.X.
0.052e-136Glycine maxHgAffx.4713.1.S1_atCD748711--4e+0At4g00210LBD31 (LOB DOMAIN-CONTAINING PROTEIN 31)C.G.S.X.
0.055e+030Hordeum vulgareHU10G19u_x_atHU10G19u--1e-1At4g01150unknown proteinC.G.S.X.
0.035e+032Oryza sativaOsAffx.12724.1.S1_at---0C.G.S.X.
0.051e-240Populus trichocarpaPtpAffx.36907.1.A1_atCV273882--2e+1At5g10880tRNA synthetase-related / tRNA ligase-relatedC.G.S.X.
0.053e+032Triticum aestivumTaAffx.132271.3.S1_atCA630053--2e-1At5g46780VQ motif-containing proteinC.G.S.X.
0.042e-134Vitis vinifera1617088_atBQ797725hypothetical protein LOC100245381-1e-31At4g35230BSK1 (BR-SIGNALING KINASE 1)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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