Gene omics information

Query gene ID ZmAffx.1536.1.S1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9199.0ZmAffx.1536.1.S1_at40794996-127--1e+1At3g61390U-box domain-containing proteinS.X.H.G.
0.8395.6ZmAffx.1356.1.S1_at40794996-158--3e+0At5g5795026S proteasome regulatory subunit, putativeS.X.H.G.
0.7188.2ZmAffx.1511.1.S1_at11990232-52--4e-48Atcg00740-S.X.H.G.
0.6785.8ZmAffx.766.1.S1_atAI746089Hypothetical protein LOC100191384-3e+0At3g12320unknown proteinS.X.H.G.
0.5369.1ZmAffx.1357.1.S1_at40794996-46--2e-1At1g26921unknown proteinS.X.H.G.
0.5369.1ZmAffx.1480.1.S1_at40794996-107--1e+1At5g1520040S ribosomal protein S9 (RPS9B)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
23.999.5GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
23.299.5GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
22.599.5GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
21.999.4GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
21.699.4GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
21.699.4GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
20.999.4GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
20.799.4GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
17.199.1GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.898.3GSM320459protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.031e+032Zm.7078.1.S1_atCD447894acyl carrier protein-6e-3At4g25050ACP4 (acyl carrier protein 4)C.G.S.X.
0.021e+032Zm.2543.1.A1_atCF634473--4e-45At1g74030enolase, putativeC.G.S.X.
0.035e+030Zm.8121.1.A1_atCF630483hypothetical protein LOC100276169-3e-2At1g63780IMP4C.G.S.X.
0.025e+030Zm.5898.1.A1_atCF631996hyoscyamine 6-dioxygenase-2e-1At1g80610unknown proteinC.G.S.X.
0.025e+030Zm.5550.1.S1_atAI622648hypothetical protein LOC100280363-2e-7At3g60600VAP (VESICLE ASSOCIATED PROTEIN)C.G.S.X.
0.015e+030Zm.508.1.S1_atCA401738hypothetical protein LOC100191390-3e-26At5g20940glycosyl hydrolase family 3 proteinC.G.S.X.
0.025e+030Zm.4272.1.S1_atAI834123hypothetical protein LOC100273049-7e-16At4g31550WRKY11C.G.S.X.
0.015e+030Zm.2708.1.S1_atCA398368--8e-8At2g26510PDE135 (pigment defective embryo 135)C.G.S.X.
0.035e+030Zm.18571.1.A1_atCO518311Hypothetical protein LOC100217207-1e+0At5g61790calnexin 1 (CNX1)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.021e+130Arabidopsis thalianaAt3g61390825311U-box domain-containing proteinF:unknown;P:unknown;C:unknown;OMFPBAV---C.G.S.X.
0.041e+034Glycine maxHgAffx.20640.1.S1_atBI749113--3e+0At5g11060KNAT4 (KNOTTED1-LIKE HOMEOBOX GENE 4)C.G.S.X.
0.041e+032Hordeum vulgareContig20794_atContig20794--5e+0At3g60010ASK13 (ARABIDOPSIS SKP1-LIKE 13)C.G.S.X.
0.036e+032Oryza sativaOs08g02113009636.m01063--4e+0At5g48420unknown proteinC.G.S.X.
0.034e+032Populus trichocarpaPtp.171.1.A1_atCV271228glutaredoxin-9e-2At2g30540glutaredoxin family proteinC.G.S.X.
0.043e+032Triticum aestivumTa.3906.3.S1_a_atBJ222125--2e-5At3g59800unknown proteinC.G.S.X.
0.053e+030Vitis vinifera1609912_atCB975159hypothetical protein LOC100249144-5e+0At2g44820unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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