Gene omics information

Query gene ID ZmAffx.1461.1.S1_at
Gene name ATP synthase epsilon chain
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9799.9ZmAffx.1461.1.S1_at11990232-28ATP synthase epsilon chain-3e-65Atcg00470-S.X.H.G.
0.8495.8ZmAffx.1372.1.S1_at40794996-160--7e-1At2g34355nodulin-relatedS.X.H.G.
0.7992.8ZmAffx.1370.1.S1_at11990232-98--5e+0At5g42955unknown proteinS.X.H.G.
0.7992.8ZmAffx.1374.1.S1_at40794996-162--0Atmg00270-S.X.H.G.
0.7691.1ZmAffx.1351.1.S1_at40794996-43--2e+0At3g21520unknown proteinS.X.H.G.
0.7590.8ZmAffx.1401.1.S1_at40794996-76--1e-80Atmg00480-S.X.H.G.
0.7389.9ZmAffx.159.1.A1_atAI668136--1e+1At5g48680sterile alpha motif (SAM) domain-containing proteinS.X.H.G.
0.7288.6ZmAffx.138.1.A1_atAI667759--3e+0At1g66510AAR2 protein familyS.X.H.G.
0.7188.2ZmAffx.1454.1.S1_at11990232-21--0Atcg00340-S.X.H.G.
0.6886.1ZmAffx.181.1.A1_atAI668330--8e-1At5g25640-S.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
6.297.4GSM320460protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.997.3GSM320459protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.797.2GSM320461protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.797.2GSM320462protocol: Methylation filtration (MF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.797.2GSM320464protocol: Methylation filtration (MF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.996.7GSM320456protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.896.6GSM253268ZM_4.5d_Mock_3inf_IGSE10023Maize gene expression during infection with Ustilago maydis
4.796.5GSM320463protocol: Methylation filtration (MF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.696.4GSM320458protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.596.3GSM320457protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.039e-236Zm.5381.1.A1_atBM079410hypothetical protein LOC100191714-2e+0At5g06590unknown proteinC.G.S.X.
0.021e+032Zm.9788.1.A1_atBM338945--1e-1At1g17545protein phosphatase 2C-related / PP2C-relatedC.G.S.X.
0.021e+032Zm.18289.1.S1_atCO532001--3e-12At2g42670unknown proteinC.G.S.X.
0.015e+030Zm.4739.1.A1_atAI665985hypothetical protein LOC100278358-2e-1At3g26010F-box family proteinC.G.S.X.
0.025e+030Zm.16264.1.S1_atCF244527hypothetical protein LOC100191674-3e-3At5g16120hydrolase, alpha/beta fold family proteinC.G.S.X.
0.025e+030Zm.14711.1.A1_atCF625292--2e-10At1g73180eukaryotic translation initiation factor-relatedC.G.S.X.
0.015e+030Zm.1072.1.S1_atCF636672Glycine cleavage complex P-protein-6e-98At4g33010AtGLDP1 (Arabidopsis thaliana glycine decarboxylase P-protein 1)C.G.S.X.
0.032e+128ZmAffx.406.9.A1_atAI670512--1e+1At5g16580BGLU2 (BETA GLUCOSIDASE 2)C.G.S.X.
0.032e+128ZmAffx.406.9.S1_atAI670512--1e+1At5g16580BGLU2 (BETA GLUCOSIDASE 2)C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.803e-65248Arabidopsis thalianaAtcg00470--ATPase epsilon subunit---C.G.S.X.
0.359e-57220Glycine maxGma.11940.2.S1_atBE440563F1 beta subunit of ATP synthase mRNA, partial cds; nuclear gene for mitochondrial product-0Atcg00480-C.G.S.X.
0.034e-134Hordeum vulgareContig3802_atContig3802--3e-76At5g11770NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrialC.G.S.X.
0.960702Oryza sativaOsAffx.32230.1.A1_at---0C.G.S.X.
0.355e-1891Populus trichocarpaPtpAffx.157535.1.A1_atCV256736hypothetical protein-7e-90Atcg00470-C.G.S.X.
0.043e+032Triticum aestivumTaAffx.55973.1.S1_atCA658874--2e+0At3g04370PDLP4 (PLASMODESMATA-LOCATED PROTEIN 4)C.G.S.X.
0.086e-73272Vitis vinifera1620265_atBQ793093--0Atcg00480-C.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage