Gene omics information

Query gene ID ZmAffx.1404.1.S1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9199.0ZmAffx.1404.1.S1_at40794996-79--1e-3Atmg00690-S.X.H.G.
0.8094.0ZmAffx.146.1.A1_atAI66782630S ribosomal protein S31-2e-1At4g21450vesicle-associated membrane family protein / VAMP family proteinS.X.H.G.
0.7188.2Zm.9233.1.A1_atBM348207pollen allergen Phl p 2-5e+0At5g55750hydroxyproline-rich glycoprotein family proteinS.X.H.G.
0.5571.6ZmAffx.1535.1.S1_at40794996-15--0Atmg01275-S.X.H.G.
0.5065.7ZmAffx.162.1.S1_atAI668180Hypothetical protein LOC100193115-2e-1At2g27240unknown proteinS.X.H.G.
0.4455.7ZmAffx.137.1.S1_atAI667708Hypothetical protein LOC100192022-8e-1At2g45130SPX3 (SPX DOMAIN GENE 3)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
27.799.7GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
26.199.6GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
24.999.6GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
22.699.5GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
20.599.3GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
20.199.3GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
19.099.2GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
15.198.9GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.898.9GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.398.7GSM320456protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.068e-959ZmAffx.837.1.A1_atAI770584--3e-9Atmg00690-C.G.S.X.
0.068e-959ZmAffx.837.1.S1_atAI770584--3e-9Atmg00690-C.G.S.X.
0.025e-134Zm.297.1.S1_atCO527021CMP-KDO synthetase1-2e-13At1g53000cytidylyltransferase familyC.G.S.X.
0.035e-134Zm.18399.1.A1_atCO534452--2e+0At5g15560unknown proteinC.G.S.X.
0.012e+032ZmAffx.1428.1.S1_at11990232-13--4e-108Atcg00180-C.G.S.X.
0.022e+032ZmAffx.1392.1.S1_at40794996-67--0Atmg00513-C.G.S.X.
0.032e+032ZmAffx.1312.1.S1_at40794996-140--3e+0At4g01595ATP binding / MAP kinase/ protein kinaseC.G.S.X.
0.022e+032Zm.6671.1.S1_a_atBM379927germin-like protein 1-7e+0At3g23167LCR39 (Low-molecular-weight cysteine-rich 39)C.G.S.X.
0.022e+032Zm.2517.5.A1_x_atCD437198z1A alpha zein protein /// z1A alpha zein protein /// z1A alpha zein protein /// z1A alpha zein protein /// z1A alpha zein protein /// z1A alpha zein protein /// z1A alpha zein protein /// z1A alpha zein protein /// hypothetical protein LOC100274904 /// zein polypeptidesL2b-2e+0At5g62360invertase/pectin methylesterase inhibitor family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.041e-344Arabidopsis thalianaAtmg00690--hypothetical protein---C.G.S.X.
0.032e+034Glycine maxHgAffx.17937.1.S1_atCD748356--1e-3At4g31700RPS6 (RIBOSOMAL PROTEIN S6)C.G.S.X.
0.061e-756Hordeum vulgarebah21p16_atbah21p16--2e-125Atmg00160-C.G.S.X.
0.069e-342Oryza sativaOs07g0482800AK062324.1--7e-15At2g07775unknown proteinC.G.S.X.
0.044e-136Populus trichocarpaPtpAffx.212756.1.S1_atpmrna24950--2e-1At3g58230unknown proteinC.G.S.X.
0.071e-344Triticum aestivumTa.22468.1.S1_atCA648119--6e-164Atmg00640-C.G.S.X.
0.043e-134Vitis vinifera1618205_atCB977043--4e+0At5g50540unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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