Gene omics information

Query gene ID ZmAffx.1400.1.S1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9199.0ZmAffx.1400.1.S1_at40794996-75--3e+0At4g05631unknown proteinS.X.H.G.
0.6785.8ZmAffx.138.1.A1_atAI667759--3e+0At1g66510AAR2 protein familyS.X.H.G.
0.6785.8ZmAffx.1372.1.S1_at40794996-160--7e-1At2g34355nodulin-relatedS.X.H.G.
0.5674.4ZmAffx.1351.1.S1_at40794996-43--2e+0At3g21520unknown proteinS.X.H.G.
0.4759.9ZmAffx.1370.1.S1_at11990232-98--5e+0At5g42955unknown proteinS.X.H.G.
0.4352.8ZmAffx.1376.1.S1_s_at40794996-51--0Atmg00080-S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
22.999.5GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
22.299.4GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
22.299.4GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
20.799.4GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
20.099.3GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
19.699.3GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
18.499.2GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
16.599.0GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
16.599.0GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.998.7GSM320456protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.023e-134Zm.7463.1.A1_atBM078503hypothetical protein LOC100276250-2e+0At1g21090hydroxyproline-rich glycoprotein family proteinC.G.S.X.
0.031e+032Zm.6868.1.A1_a_atAI065511transposon protein Pong sub-class-1e+0At5g25560zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.021e+032Zm.6296.1.A1_atCF602635--5e-1At2g46870NGA1 (NGATHA1)C.G.S.X.
0.031e+032Zm.350.1.S1_atU62753.1acidic ribosomal protein P2b-4e-1At2g2771060S acidic ribosomal protein P2 (RPP2B)C.G.S.X.
0.021e+032Zm.13694.1.A1_atAY106750.1--3e+0At5g05430-C.G.S.X.
0.021e+032Zm.13694.1.S1_atBG267109--3e+0At5g05430-C.G.S.X.
0.011e+032Zm.13193.1.A1_atCD991429--4e-6At4g14990unknown proteinC.G.S.X.
0.035e+030Zm.8864.1.A1_atBM269430hypothetical protein LOC100278083-6e+0At4g13720inosine triphosphate pyrophosphatase, putative / HAM1 family proteinC.G.S.X.
0.035e+030Zm.8864.1.A1_s_atBM269430hypothetical protein LOC100278083-6e+0At4g13720inosine triphosphate pyrophosphatase, putative / HAM1 family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.033e+032Arabidopsis thalianaAt4g05631825936unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown---C.G.S.X.
0.041e+034Glycine maxGmaAffx.76536.1.S1_atBE800011--4e+0At5g06690WCRKC1 (WCRKC THIOREDOXIN 1)C.G.S.X.
0.036e+030Hordeum vulgareHVSMEg0011N18r2_atHVSMEg0011N18r2--6e-2At1g13607-C.G.S.X.
0.036e+032Oryza sativaOsAffx.21764.1.S1_at---0C.G.S.X.
0.051e+034Populus trichocarpaPtpAffx.44495.1.A1_s_atCV230381--3e+0At1g57730zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.058e-134Triticum aestivumTaAffx.29984.1.S1_atCA631226--8e+0At5g53144unknown proteinC.G.S.X.
0.049e-132Vitis vinifera1621408_atBQ798831hypothetical protein LOC100244724-5e+0Atmg01370-C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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