Gene omics information

Query gene ID	ZmAffx.1203.1.S1_at
Gene name	lipase
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.61	79.5	ZmAffx.1203.1.S1_at	BE128869	lipase	-	3e-9	At1g10740	unknown protein	S.X.	H.G.	Please select
0.33	36.0	Zm.3181.1.A1_at	CK347136	COP9 signalosome complex subunit 6a	-	8e-35	At5g56280	CSN6A	S.X.	H.G.	Please select
0.31	31.6	Zm.12557.1.A1_at	AI691470	-	-	3e+0	At3g01450	binding	S.X.	H.G.	Please select
0.25	21.3	ZmAffx.1213.1.S1_at	BU051439	-	-	2e-1	At3g10190	calmodulin, putative	S.X.	H.G.	Please select
0.23	18.6	Zm.3182.1.A1_at	CK827062	hypothetical protein LOC100273880	-	2e-1	At3g13310	DNAJ heat shock N-terminal domain-containing protein	S.X.	H.G.	Please select
0.15	8.6	Zm.12619.1.A1_at	BM953641	hypothetical protein LOC100193537	-	4e+0	At5g39880	unknown protein	S.X.	H.G.	Please select
0.14	7.7	Zm.7369.1.A1_at	CD976747	integral membrane protein like	-	6e-3	At1g34020	transporter-related	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
13.5	98.8	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.6	98.6	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.6	98.6	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.4	98.5	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.8	98.5	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.2	98.4	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.1	98.4	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.8	98.3	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.6	98.3	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.8	97.2	GSM375795	Deep-sowing 10d treatment Control, biological rep2	GSE15048	Gibberellin-induced gene expression in maize mesocotyl under deep-sowing condition

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
1.00	0	807	ZmAffx.1203.1.A1_at	BE128869	-	-	2e-10	At1g23330	unknown protein	C.G.	S.X.	Please select
0.04	9e-2	36	Zm.8787.1.A1_at	CB350639	-	-	3e-1	At3g01170	structural constituent of ribosome	C.G.	S.X.	Please select
0.02	9e-2	36	Zm.2199.2.S1_at	CA404051	IWS1 C-terminus family protein	-	2e-17	At1g32130	-	C.G.	S.X.	Please select
0.02	3e-1	34	Zm.3782.1.S1_at	AW066955	vacuolar protein sorting 26	-	1e-48	At4g27690	VPS26B (VACUOLAR PROTEIN SORTING 26B)	C.G.	S.X.	Please select
0.02	1e+0	32	Zm.4144.1.S1_at	AY104561.1	-	-	5e-1	At1g62421	unknown protein	C.G.	S.X.	Please select
0.01	1e+0	32	Zm.13052.1.S1_at	AY107104.1	indeterminate growth1	-	5e-6	At1g14580	zinc finger (C2H2 type) family protein	C.G.	S.X.	Please select
0.01	1e+0	32	Zm.10807.1.S1_at	AY106975.1	hypothetical protein LOC100280257	-	4e-19	At3g16060	kinesin motor family protein	C.G.	S.X.	Please select
0.03	5e+0	30	Zm.9659.1.A1_at	BM350799	-	-	4e-1	At1g69510	-	C.G.	S.X.	Please select
0.03	5e+0	30	Zm.7385.1.A1_at	CF626198	-	-	7e+0	At5g19473	-	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.15	3e-9	61	Arabidopsis thaliana	At1g10740	837617	unknown protein	F:unknown;P:glycerol biosynthetic process;C:endomembrane system;BOPFM	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.06	2e-2	40	Glycine max	Gma.4287.1.S1_at	BE659173	-	-	2e-15	At1g23330	unknown protein	C.G.	S.X.	Please select
0.34	2e-111	400	Hordeum vulgare	Contig11036_at	Contig11036	-	-	3e-6	At1g10740	unknown protein	C.G.	S.X.	Please select
0.32	1e-108	393	Oryza sativa	Os05g0408300	AK071584.1	-	Conserved hypothetical protein	2e-4	At1g10740	unknown protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.09	2e-5	50	Populus trichocarpa	PtpAffx.59548.1.S1_at	CV261971	-	-	3e-18	At1g10740	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.23	6e-82	303	Triticum aestivum	Ta.22936.1.S1_at	CA656346	-	-	2e-8	At1g23330	unknown protein	C.G.	S.X.	Please select
0.25	3e-13	73	Vitis vinifera	1608032_at	CF512550	hypothetical protein LOC100260858	-	8e-15	At1g10740	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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