Gene omics information

Query gene ID ZmAffx.1176.1.A1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9097.0ZmAffx.1176.1.A1_atAW927389--8e-1At3g18250unknown proteinS.X.H.G.
0.4455.7Zm.13632.1.A1_atCO532913hypothetical protein LOC100191724-5e+0At5g20400oxidoreductase, 2OG-Fe(II) oxygenase family proteinS.X.H.G.
0.4251.3Zm.11586.1.A1_atBM379136--6e+0Atmg00280-S.X.H.G.
0.3844.2Zm.13456.2.A1_atAY111230.1Hypothetical protein LOC100194201-5e+0At3g50520phosphoglycerate/bisphosphoglycerate mutase family proteinS.X.H.G.
0.3641.3Zm.3964.1.A1_a_atAF205603.1ferric-chelate reductase (NADH)2-1e-17At5g17770ATCBR (ARABIDOPSIS THALIANA NADH:CYTOCHROME B5 REDUCTASE 1)S.X.H.G.
0.3641.3Zm.4510.3.S1_atAI734509hypothetical protein LOC100193304-2e-1At5g24879unknown proteinS.X.H.G.
0.3538.9Zm.6147.2.S1_atCD942228--4e-24At3g51800ATG2S.X.H.G.
0.3336.0Zm.10593.1.A1_atBM380000hypothetical protein LOC100194168-1e+0At3g55350unknown proteinS.X.H.G.
0.3336.0Zm.15761.1.S1_atCD445921--1e-17At1g10520DNA polymerase lambda (POLL)S.X.H.G.
0.3131.6Zm.17625.1.A1_atCF631845--4e-23At1g10200WLIM1S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
36.699.9GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
36.399.9GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
32.799.8GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
29.299.8GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
25.599.6GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
19.499.3GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
18.299.2GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
18.199.2GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.698.8GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.097.7GSM320460protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
1.000807ZmAffx.1176.1.S1_atAW927389--8e-1At3g18250unknown proteinC.G.S.X.
0.023e-134Zm.4578.2.S1_atCO521260hypothetical protein LOC100279630 /// MADS1-2e-4At2g22540SVP (SHORT VEGETATIVE PHASE)C.G.S.X.
0.013e-134Zm.224.1.S1_atY17898.1outer cell layer1-1e-7At4g00730ANL2 (ANTHOCYANINLESS 2)C.G.S.X.
0.033e-134Zm.1101.1.S1_atCK787135--2e+0At5g43460lesion inducing protein-relatedC.G.S.X.
0.021e+032Zm.6853.1.A1_atAI629950hypothetical LOC542208-5e-2At5g23760heavy-metal-associated domain-containing proteinC.G.S.X.
0.021e+032Zm.6583.1.A1_atAY111761.1hypothetical protein LOC100273289-2e-3At3g45000VPS24.2C.G.S.X.
0.021e+032Zm.4518.1.A1_atCO528211--2e+0At5g61270PIF7 (PHYTOCHROME-INTERACTING FACTOR7)C.G.S.X.
0.011e+032Zm.3827.1.S1_atCA829504--4e-3At4g00090transducin family protein / WD-40 repeat family proteinC.G.S.X.
0.011e+032Zm.3701.1.S1_atCF636730cysteine protease 1-1e-2At5g43060cysteine proteinase, putative / thiol protease, putativeC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.058e-134Arabidopsis thalianaAt3g18250821353unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBMFO---C.G.S.X.
0.053e-136Glycine maxHgAffx.13312.1.S1_atCB374670--2e-5At4g13940MEE58 (MATERNAL EFFECT EMBRYO ARREST 58)C.G.S.X.
0.046e-340Hordeum vulgareContig3870_atContig3870--4e-44At5g20570RBX1 (RING-BOX 1)C.G.S.X.
0.102e-43176Oryza sativaOs11g06724009639.m04170-Kinesin, motor region domain containing protein6e-12At2g47500ATP binding / microtubule motorC.G.S.X.
0.122e-1169Populus trichocarpaPtpAffx.73634.1.S1_s_atDN502654hypothetical protein-6e-55At2g47500ATP binding / microtubule motorC.G.S.X.
0.052e-136Triticum aestivumTa.16013.1.S1_atCA595031--3e+0At5g65410HB25 (HOMEOBOX PROTEIN 25)C.G.S.X.
0.034e+030Vitis vinifera1614419_atCD719790--1e+0At5g142003-isopropylmalate dehydrogenase, chloroplast, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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