Gene omics information

Query gene ID ZmAffx.1172.1.A1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5571.6ZmAffx.1172.1.A1_atAW787638--5e+0At1g15165U-box domain-containing proteinS.X.H.G.
0.8395.6Zm.11655.1.A1_atBM379701Grx_C8 - glutaredoxin subgroup III-3e-17At3g02000ROXY1S.X.H.G.
0.8395.6Zm.9670.2.A1_a_atAY110378.1--4e-4At1g60660CB5LP (CYTOCHROME B5-LIKE PROTEIN)S.X.H.G.
0.8094.0Zm.11764.1.A1_atAY109047.1GIR1 /// GIR1-1e+0At5g62210embryo-specific protein-relatedS.X.H.G.
0.6986.5ZmAffx.32.1.A1_s_atAI657422rhodopsin-like receptor-3e+0At1g12020unknown proteinS.X.H.G.
0.6886.1ZmAffx.283.1.S1_atAI670414--3e+0At3g23175lesion inducing protein-relatedS.X.H.G.
0.6785.8ZmAffx.820.1.S1_atAI770463hypothetical protein LOC100217195-8e-1At5g23950C2 domain-containing proteinS.X.H.G.
0.6785.8Zm.18145.1.S1_atBU079975--1e+1At5g46890protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinS.X.H.G.
0.6381.1Zm.5741.2.A1_atBM074874Hypothetical protein LOC100191775-4e+0At5g46940invertase/pectin methylesterase inhibitor family proteinS.X.H.G.
0.6381.1Zm.17694.1.S1_atCK370322--5e+0At3g2223060S ribosomal protein L27 (RPL27B)S.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
34.199.9GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
31.399.8GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
28.699.7GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
27.299.7GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
21.599.4GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
19.599.3GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
19.499.3GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
17.199.1GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
16.099.0GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.298.0GSM320464protocol: Methylation filtration (MF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
1.004e-88321ZmAffx.1172.1.S1_atAW787638hypothetical protein LOC100273964-5e+0At1g15165U-box domain-containing proteinC.G.S.X.
0.035e-132Zm.6024.1.A1_atAW066865--2e+0At5g18500protein kinase family proteinC.G.S.X.
0.072e+030ZmAffx.1117.1.A1_atAW257962--2e+0At3g15150zinc ion bindingC.G.S.X.
0.072e+030ZmAffx.1117.1.S1_atAW257962--2e+0At3g15150zinc ion bindingC.G.S.X.
0.012e+030Zm.5796.1.S1_atAI649702--3e-41At1g62750SCO1 (SNOWY COTYLEDON 1)C.G.S.X.
0.012e+030Zm.5796.1.A1_atBM332299--3e-41At1g62750SCO1 (SNOWY COTYLEDON 1)C.G.S.X.
0.042e+030Zm.19208.1.A1_atCO525556--1e+0At1g04930hydroxyproline-rich glycoprotein family proteinC.G.S.X.
0.012e+030Zm.18044.1.A1_atAF519538.1RNA polymerase II largest subunit-2e-123At4g35800NRPB1 (RNA POLYMERASE II LARGE SUBUNIT)C.G.S.X.
0.012e+030Zm.18044.1.S1_atAF519538.1RNA polymerase II largest subunit-2e-123At4g35800NRPB1 (RNA POLYMERASE II LARGE SUBUNIT)C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.035e+030Arabidopsis thalianaAt1g15165838082U-box domain-containing proteinF:ubiquitin-protein ligase activity;P:protein ubiquitination;C:endomembrane system, ubiquitin ligase complex;POBM---C.G.S.X.
0.076e+030Glycine maxGmaAffx.75042.1.A1_atCD397233--3e+0At5g08141AtbZIP75 (Arabidopsis thaliana basic leucine-zipper 75)C.G.S.X.
0.052e+030Hordeum vulgareHS18N01u_x_atHS18N01u--1e-2At3g23010AtRLP36 (Receptor Like Protein 36)C.G.S.X.
0.042e+032Oryza sativaOs01g0264400NM_187993.1-Conserved hypothetical protein2e-4At3g10040transcription factorC.G.S.X.
0.071e-136Populus trichocarpaPtpAffx.30879.1.A1_atCV258015hypothetical protein-4e-2At1g68070zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.062e-238Triticum aestivumTa.28750.2.A1_x_atBG905748--1e+0At1g79040PSBR (photosystem II subunit R)C.G.S.X.
0.045e+028Vitis vinifera1618796_atCF371837--2e-1At1g63060unknown proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage