Gene omics information

Query gene ID ZmAffx.1162.1.S1_at
Gene name hypothetical protein LOC100278489
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8595.9ZmAffx.1162.1.S1_atAW447878hypothetical protein LOC100278489-2e-1At4g349201-phosphatidylinositol phosphodiesterase-relatedS.X.H.G.
0.5571.6---0S.X.H.G.
0.5369.1Zm.12162.2.S1_a_atBM498680SEC13-related protein /// SEC13-related protein-2e-4At2g30050transducin family protein / WD-40 repeat family proteinS.X.H.G.
0.4759.9Zm.4359.2.A1_x_atAI795776EMB2756-2e+0At5g52160protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinS.X.H.G.
0.4759.9ZmAffx.734.1.A1_atAI740044--1e+1At5g01670aldose reductase, putativeS.X.H.G.
0.4658.4Zm.8734.1.A1_atCA403611hypothetical protein LOC100275773-3e-16At2g42230tubulin-specific chaperone C-relatedS.X.H.G.
0.4455.7Zm.14107.2.A1_atAI770963--8e-1At3g56880VQ motif-containing proteinS.X.H.G.
0.4352.8Zm.5848.1.S1_atCO529387phosphoglycerate mutase gpmB-6e-1At5g62320ATMYB99 (MYB DOMAIN PROTEIN 99)S.X.H.G.
0.4352.8Zm.14784.1.A1_atBG841481--3e+0At3g01175-S.X.H.G.
0.4149.7Zm.7645.1.A1_atBM379053--5e+0At5g46300unknown proteinS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
29.199.8GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
22.099.4GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
20.199.3GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.698.7GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.398.7GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.798.5GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.697.1GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.695.2GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.394.7GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.190.8GSM202304B73 immature ear tissue, biological replicate 3GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
1.000807ZmAffx.1162.1.A1_atAW447878--2e-1At4g349201-phosphatidylinositol phosphodiesterase-relatedC.G.S.X.
0.023e-134Zm.9839.1.S1_atAY105069.1hypothetical protein LOC100193033-3e+0At2g17300unknown proteinC.G.S.X.
0.023e-134Zm.9839.1.A1_atBM339393Hypothetical protein LOC100193033-3e+0At2g17300unknown proteinC.G.S.X.
0.021e+032Zm.6923.1.S1_atAY104489.1--8e-1At5g01410RSR4 (REDUCED SUGAR RESPONSE 4)C.G.S.X.
0.031e+032Zm.552.1.A1_atAF244691.1glutathione S-transferase GST 26-7e+0At5g09470mitochondrial substrate carrier family proteinC.G.S.X.
0.021e+032Zm.16593.1.A1_atCF629794Hypothetical protein LOC100192949-5e-20At5g6117040S ribosomal protein S19 (RPS19C)C.G.S.X.
0.041e+032Zm.16593.9.S1_x_atAI657431Hypothetical protein LOC100192949-1e-2At5g1552040S ribosomal protein S19 (RPS19B)C.G.S.X.
0.021e+032Zm.16593.1.A1_a_atCF629794hypothetical protein LOC100192949-5e-20At5g6117040S ribosomal protein S19 (RPS19C)C.G.S.X.
0.041e+032Zm.16593.15.A1_x_atAI668523hypothetical protein LOC100192949-1e-2At5g1552040S ribosomal protein S19 (RPS19B)C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.032e-136Arabidopsis thalianaAt4g349208296441-phosphatidylinositol phosphodiesterase-relatedF:phospholipase C activity, phosphoric diester hydrolase activity;P:triglyceride biosynthetic process, intracellular signaling cascade, lipid metabolic process, phospholipid biosynthetic process;C:cellular_component unknown;BMFPO---C.G.S.X.
0.044e+032Glycine maxPsAffx.CL1234Contig1_atPsAffx.CL1234Contig1--1e+1At5g59080unknown proteinC.G.S.X.
0.336e-40163Hordeum vulgareContig8358_atContig8358--1e-1At3g25400-C.G.S.X.
0.337e-43174Oryza sativaOs01g0559200AK102611.1-Hypothetical protein4e-2At2g46140late embryogenesis abundant protein, putative / LEA protein, putativeC.G.S.X.
0.043e-136Populus trichocarpaPtpAffx.31489.2.A1_a_atCK089606hypothetical protein-1e+0At1g28007unknown proteinC.G.S.X.
0.334e-49194Triticum aestivumTa.6164.1.S1_atBJ215034--1e-1At3g25400-C.G.S.X.
0.049e-132Vitis vinifera1610392_atCF415548--2e-1At2g24762AtGDU4 (Arabidopsis thaliana GLUTAMINE DUMPER 4)C.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage