Gene omics information

Query gene ID ZmAffx.1143.1.S1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9199.0ZmAffx.1143.1.S1_atAW399931--8e+0At5g01340mitochondrial substrate carrier family proteinS.X.H.G.
0.8395.6ZmAffx.1501.1.S1_at40794996-118--8e-1At5g12300C2 domain-containing proteinS.X.H.G.
0.7389.9ZmAffx.1538.1.S1_at40794996-128--3e+0At3g21730dihydroneopterin aldolase family proteinS.X.H.G.
0.6785.8ZmAffx.1480.1.S1_at40794996-107--1e+1At5g1520040S ribosomal protein S9 (RPS9B)S.X.H.G.
0.6785.8ZmAffx.1357.1.S1_at40794996-46--2e-1At1g26921unknown proteinS.X.H.G.
0.5674.4ZmAffx.171.1.S1_atAI668231Hypothetical protein LOC100192595-3e+0At1g51160synbindin, putativeS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
5.296.9GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.396.1GSM290554WS2 with array type maize from AffymetrixGSE11531Downregulation of cinnamoyl-coenzyme A reductase in maize (affy_ccr_maize)
4.296.0GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.995.7GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.895.5GSM320439protocol: mRNA - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.795.4GSM320438protocol: mRNA - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.595.1GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.793.2GSM290555CCR mutant M1 with array type maize from AffymetrixGSE11531Downregulation of cinnamoyl-coenzyme A reductase in maize (affy_ccr_maize)
2.793.2GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.793.2GSM290553WS1 with array type maize from AffymetrixGSE11531Downregulation of cinnamoyl-coenzyme A reductase in maize (affy_ccr_maize)
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
1.002e-134476ZmAffx.1143.1.A1_atAW399931--8e+0At5g01340mitochondrial substrate carrier family proteinC.G.S.X.
0.029e-132Zm.8300.1.A1_atCO529148adenyl cyclase-1e-2At4g15640unknown proteinC.G.S.X.
0.049e-132Zm.16206.1.S1_atBG268599HMG-like nucleosome/chromatin assembly factor D-7e-2At2g32930ZFN2 (ZINC FINGER NUCLEASE 2)C.G.S.X.
0.019e-132Zm.1519.1.S1_atAF033263.1blue-light receptor phototropin 1-5e-16At3g45780PHOT1 (PHOTOTROPIN 1)C.G.S.X.
0.014e+030Zm.6094.1.A1_atAY109315.1hypothetical protein LOC100277153-6e-2At5g03880electron carrierC.G.S.X.
0.024e+030Zm.5302.1.A1_atBG836267--6e-1At5g42630ATS (ABERRANT TESTA SHAPE)C.G.S.X.
0.024e+030Zm.5302.1.S1_atBG836267--6e-1At5g42630ATS (ABERRANT TESTA SHAPE)C.G.S.X.
0.034e+030Zm.16582.1.A1_atCF628035hypothetical protein LOC100280159-2e+1At5g57747unknown proteinC.G.S.X.
0.021e+128Zm.9571.1.A1_atBM079058hypothetical protein LOC100273203-5e-1At3g11660NHL1C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.038e+030Arabidopsis thalianaAt5g01340831479mitochondrial substrate carrier family proteinF:transporter activity, binding;P:transport, mitochondrial transport;C:mitochondrial inner membrane, membrane;MFPO---C.G.S.X.
0.053e+032Glycine maxGmaAffx.75094.1.A1_atCD407700--7e-1At2g41610unknown proteinC.G.S.X.
0.063e-134Hordeum vulgareHA01L11u_x_atHA01L11u--2e-1At5g02680ATP binding / aminoacyl-tRNA ligase/ nucleotide bindingC.G.S.X.
0.044e+032Oryza sativaOsAffx.25815.1.S1_s_at---0C.G.S.X.
0.051e+130Populus trichocarpaPtpAffx.44537.1.A1_s_atCV228543hypothetical protein-1e+1At5g18250unknown proteinC.G.S.X.
0.058e+030Triticum aestivumTaAffx.78206.1.S1_atCA735983--3e+0At2g42190unknown proteinC.G.S.X.
0.052e+030Vitis vinifera1618062_atCB969742--9e-3At4g17860unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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