Gene omics information

Query gene ID ZmAffx.1053.1.A1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5571.6ZmAffx.1053.1.A1_atAI881846--3e+0At1g16240SYP51 (SYNTAXIN OF PLANTS 51)S.X.H.G.
0.5976.1Zm.5132.1.A1_atAY105555.1calcium lipid binding protein-like-7e-1At1g15320unknown proteinS.X.H.G.
0.5065.7Zm.4359.2.A1_atAI795776EMB2756-2e+0At5g52160protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinS.X.H.G.
0.4455.7Zm.144.2.A1_atBE123186Metallothionein2-1e+1At3g58370K-Cl Co-transporter type 1 protein-related / KCC1 protein-relatedS.X.H.G.
0.3131.6Zm.19103.1.S1_atCF625279hypothetical protein LOC100193224-3e+0At4g09490RNase H domain-containing proteinS.X.H.G.
0.094.0Zm.16394.1.S1_atCF272871--1e-1At2g03470myb family transcription factor / ELM2 domain-containing proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
67.8100.0GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
46.2100.0GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
35.299.9GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
28.299.7GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
23.299.5GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
20.299.3GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.598.4GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.097.3GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.695.2GSM320456protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.494.9GSM320471protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
1.000801ZmAffx.1053.1.S1_atAI881846--5e-2At4g37390BRU6C.G.S.X.
0.331e-167587Zm.13354.1.S1_s_atAW067009indole-3-acetic acid-amido synthetase GH3.8-4e-12At2g14960GH3.1C.G.S.X.
0.023e-134Zm.777.1.S1_a_atCD442368hypothetical protein LOC100272376-4e-8At5g633804-coumarate--CoA ligase family protein / 4-coumaroyl-CoA synthase family proteinC.G.S.X.
0.013e-134Zm.19066.1.S1_atCD975063--1e-37At2g02000GAD3 (glutamate decarboxylase 3)C.G.S.X.
0.023e-134Zm.13727.1.A1_atCK986131NADPH quinone oxidoreductase 1-2e-6At3g27890NQR (NADPH:QUINONE OXIDOREDUCTASE)C.G.S.X.
0.021e+032Zm.8793.1.A1_atCD436545--3e+0At5g11770NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrialC.G.S.X.
0.021e+032Zm.7998.1.A1_atAY106482.1hypothetical protein LOC100273454-3e+0At4g11680zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.031e+032Zm.7363.1.A1_atBM079340SAUR55 - auxin-responsive SAUR family member-6e+0At4g24950unknown proteinC.G.S.X.
0.021e+032Zm.5805.2.A1_a_atAI649736filamentation temperature-sensitive H 2A /// filamentation temperature-sensitive H 2B-2e-56At1g06430FTSH8C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.033e+032Arabidopsis thalianaAt1g16240838193SYP51 (SYNTAXIN OF PLANTS 51)Encodes one of 24 Arabidopsis syntaxins. Its mRNA has been shown to be expressed.---C.G.S.X.
0.068e-857Glycine maxGmaAffx.3864.1.S1_atBU547804--2e-9At4g37390BRU6C.G.S.X.
0.041e-136Hordeum vulgareContig14245_atContig14245--4e-1At5g25190ethylene-responsive element-binding protein, putativeC.G.S.X.
0.271e-133476Oryza sativaOs07g0592600AK101193.1-GH3 homolog (Fragment)3e-16At2g14960GH3.1C.G.S.X.
0.034e+032Populus trichocarpaPtpAffx.220676.1.S1_atpmrna37086hypothetical protein-2e+1At4g33100-C.G.S.X.
0.531e-89329Triticum aestivumTaAffx.87187.1.S1_atCA594339--6e-6At2g14960GH3.1C.G.S.X.
0.041e+128Vitis vinifera1622458_atCB001788--1e+0At1g51570C2 domain-containing proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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