Gene omics information

Query gene ID ZmAffx.1.1.S1_s_at
Gene name hypothetical LOC542518
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9199.0ZmAffx.1.1.S1_s_atAY722707.1hypothetical LOC542518-5e-51At1g57870ATSK42 (ARABIDOPSIS SHAGGY-LIKE KINASE 42)S.X.H.G.
0.8094.0Zm.14036.1.S1_atX55388.1embryo specific protein1-3e-2At2g40170GEA6 (LATE EMBRYOGENESIS ABUNDANT 6)S.X.H.G.
0.5065.7Zm.12387.1.S1_atAW000286--2e+1Atmg01300-S.X.H.G.
0.4658.4Zm.6977.5.A1_atAI881652Sucrose synthase-1e-11At5g20830SUS1 (SUCROSE SYNTHASE 1)S.X.H.G.
0.4455.7Zm.13494.1.A1_atAY108782.1--4e-1At2g17300unknown proteinS.X.H.G.
0.3131.6Zm.5451.1.S1_atAI621979--8e-4At4g36970remorin family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
6.297.4GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.697.1GSM206293Right pulvinus control total RNA biorep 1GSE8320Transcriptional and translational gene regulation in the maize pulvinus
5.597.1GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.996.7GSM206287Left pulvinus control total RNA biorep 1GSE8320Transcriptional and translational gene regulation in the maize pulvinus
4.696.4GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.396.1GSM206305Right pulvinus control polysomal RNA biorep 1GSE8320Transcriptional and translational gene regulation in the maize pulvinus
4.195.9GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.895.5GSM206292Upper pulvinus 60 min total RNA biorep 1GSE8320Transcriptional and translational gene regulation in the maize pulvinus
3.895.5GSM206298Lower pulvinus 60 min total RNA biorep 1GSE8320Transcriptional and translational gene regulation in the maize pulvinus
3.795.4GSM206291Upper pulvinus 30 min total RNA biorep 1GSE8320Transcriptional and translational gene regulation in the maize pulvinus
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
1.0002539ZmAffx.1.1.S1_atAY722707.1hypothetical LOC542518-5e-51At1g57870ATSK42 (ARABIDOPSIS SHAGGY-LIKE KINASE 42)C.G.S.X.
0.6401235Zm.2656.2.S1_s_atAY111594.1hypothetical LOC542518-1e-7At1g57870ATSK42 (ARABIDOPSIS SHAGGY-LIKE KINASE 42)C.G.S.X.
0.5801235Zm.2656.2.A1_atAY111594.1hypothetical LOC542518-1e-7At1g57870ATSK42 (ARABIDOPSIS SHAGGY-LIKE KINASE 42)C.G.S.X.
0.5501233Zm.2656.1.S1_atBM379046Hypothetical LOC542518-9e-40At1g09840ATSK41 (SHAGGY-LIKE PROTEIN KINASE 41)C.G.S.X.
0.166e-27121Zm.6802.2.S1_atAI612473glycogen synthase kinase-3 MsK-3-2e-42At5g14640SK13 (SHAGGY-LIKE KINASE 13)C.G.S.X.
0.166e-27121Zm.6802.1.S1_atAI737806glycogen synthase kinase-3 MsK-3-2e-42At5g14640SK13 (SHAGGY-LIKE KINASE 13)C.G.S.X.
0.139e-2097Zm.377.1.A1_atAI714846shaggy kinase homolog-2e-35At5g26751ATSK11C.G.S.X.
0.193e-1065Zm.9549.1.S1_atAY106255.1shaggy-related protein kinase eta-3e-65At4g18710BIN2 (BRASSINOSTEROID-INSENSITIVE 2)C.G.S.X.
0.128e-857Zm.2849.2.A1_atCF057194hypothetical protein LOC100193185-3e-24At1g06390GSK1 (GSK3/SHAGGY-LIKE PROTEIN KINASE 1)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.485e-51202Arabidopsis thalianaAt1g57870842162ATSK42 (ARABIDOPSIS SHAGGY-LIKE KINASE 42)F:protein serine/threonine kinase activity, protein kinase activity, ATP binding;P:response to salt stress, hyperosmotic response;C:cytosol;MOPFBVA---C.G.S.X.
0.304e-52206Glycine maxGma.4037.1.S1_atAW309605--2e-177At1g09840ATSK41 (SHAGGY-LIKE PROTEIN KINASE 41)C.G.S.X.
0.332e-82305Hordeum vulgareContig12188_s_atContig12188--3e-23At1g57870ATSK42 (ARABIDOPSIS SHAGGY-LIKE KINASE 42)C.G.S.X.
0.5801084Oryza sativaOs03g0841800AK070062.1-Shaggy-related protein kinase kappa (EC 2.7.1.-)(ASK-kappa) (AtK-1)4e-74At1g57870ATSK42 (ARABIDOPSIS SHAGGY-LIKE KINASE 42)C.G.S.X.
0.332e-35151Populus trichocarpaPtp.4916.1.S1_s_atCV270159hypothetical protein-6e-165At5g26751ATSK11C.G.S.X.
0.216e-29129Triticum aestivumTa.20401.1.S1_atBJ261212Shaggy-like kinase-3e-35At5g14640SK13 (SHAGGY-LIKE KINASE 13)C.G.S.X.
0.387e-66250Vitis vinifera1615576_atCB970198--1e-147At1g09840ATSK41 (SHAGGY-LIKE PROTEIN KINASE 41)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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