Gene omics information

Query gene ID Zm.990.1.A1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5976.1Zm.990.1.A1_atCF636054--1e+1At5g44345F-box family protein-relatedS.X.H.G.
0.7188.2Zm.847.1.S1_atL00973.1hypothetical protein LOC100274400-1e-1At1g02360chitinase, putativeS.X.H.G.
0.6179.5Zm.17599.1.A1_atCK370802protein binding protein-7e+0At5g24660LSU2 (RESPONSE TO LOW SULFUR 2)S.X.H.G.
0.5571.6Zm.9004.1.S1_atBM074268hypothetical protein LOC100194029-6e-4At2g37660binding / catalytic/ coenzyme bindingS.X.H.G.
0.4455.7Zm.9659.1.A1_atBM350799--4e-1At1g69510-S.X.H.G.
0.3336.0Zm.7914.1.A1_atAY103800.1hypothetical protein LOC100277669-5e-11At3g21175ZML1 (ZIM-LIKE 1)S.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
18.999.2GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
15.398.9GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.398.9GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.698.8GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.698.7GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.398.5GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.298.2GSM162267Mutant 1 with array type maize from AffymetrixGSE7030Phenotypic and molecular characterisation of a novel Bt2 allele in maize
4.596.3GSM385709Deep-sowing 10d treatment TIBA, biological rep1GSE15371Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowing
4.296.0GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.995.7GSM162264Mutant 2 with array type maize from AffymetrixGSE7030Phenotypic and molecular characterisation of a novel Bt2 allele in maize
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.078e-1167Zm.7361.1.A1_atAY108454.1hypothetical protein LOC100272701-6e-1At5g54360zinc finger (C2H2 type) family protein-relatedC.G.S.X.
0.035e-342Zm.12164.1.A1_atCO521714hypothetical protein LOC100193480-1e-1At5g60490FLA12C.G.S.X.
0.032e-240Zm.9846.1.A1_atBM340911--8e-2At1g04445zinc finger (C2H2 type) family proteinC.G.S.X.
0.012e-240Zm.7914.1.A1_atAY103800.1hypothetical protein LOC100277669-5e-11At3g21175ZML1 (ZIM-LIKE 1)C.G.S.X.
0.012e-240Zm.7914.1.A1_a_atAY103800.1hypothetical protein LOC100277669-5e-11At3g21175ZML1 (ZIM-LIKE 1)C.G.S.X.
0.012e-240Zm.13164.1.A1_atCD437268--8e-1At1g22380AtUGT85A3 (UDP-glucosyl transferase 85A3)C.G.S.X.
0.037e-238ZmAffx.117.1.A1_atAI665629serine/threonine-protein kinase NAK-8e+0At3g12835unknown proteinC.G.S.X.
0.037e-238ZmAffx.117.1.S1_atAI665629--8e+0At3g12835unknown proteinC.G.S.X.
0.027e-238Zm.6532.1.A1_atU09276.1abscisic stress protein homolog-1e-1At1g62060unknown proteinC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.021e+132Arabidopsis thalianaAt5g44345834460F-box family protein-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P---C.G.S.X.
0.024e-344Glycine maxPsAffx.CL145Contig2_atPsAffx.CL145Contig2--1e+0At4g34290SWIB complex BAF60b domain-containing proteinC.G.S.X.
0.233e-35149Hordeum vulgareContig10786_atContig10786--1e-2At3g09070glycine-rich proteinC.G.S.X.
0.251e-34149Oryza sativaOs08g0516900AA753851-Conserved hypothetical protein8e-3At3g55460SCL30C.G.S.X.
0.024e+034Populus trichocarpaPtpAffx.224082.1.S1_x_atpmrna42319hypothetical protein-1e-2At5g61030GR-RBP3 (glycine-rich RNA-binding protein 3)C.G.S.X.
0.178e-1685Triticum aestivumTaAffx.105801.1.S1_s_atBQ803283--5e+0At3g23170unknown proteinC.G.S.X.
0.025e-238Vitis vinifera1610884_atCA818555similar to peptidase S41 family protein-9e-17At3g57680peptidase S41 family proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage