Gene omics information

Query gene ID Zm.9872.1.A1_at
Gene name hypothetical protein LOC100277709
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6785.8Zm.9872.1.A1_atBQ538232hypothetical protein LOC100277709-1e+0At1g62840unknown proteinS.X.H.G.
0.3336.0Zm.16578.1.A1_s_atCK369163aquaporin NIP-type-3e-1At5g37820NIP4S.X.H.G.
0.051.9Zm.5789.13.S1_a_atAI670670Hypothetical protein LOC100192516-8e-7At1g43170ARP1 (ARABIDOPSIS RIBOSOMAL PROTEIN 1)S.X.H.G.
0.031.1Zm.14921.1.S1_atCF056081hypothetical protein LOC100272723-4e-1At3g01560proline-rich family proteinS.X.H.G.
0.031.1ZmAffx.1215.1.S1_s_at6273844--9e-1At5g64850unknown proteinS.X.H.G.
0.020.7Zm.10503.1.S1_atAY108225.1hypothetical protein LOC100278403-8e-1At4g20010PTAC9 (PLASTID TRANSCRIPTIONALLY ACTIVE 9)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
18.399.2GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
17.899.1GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.198.5GSM162266Wild type 2 with array type maize from AffymetrixGSE7030Phenotypic and molecular characterisation of a novel Bt2 allele in maize
10.498.4GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.698.1GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.298.0GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.098.0GSM162264Mutant 2 with array type maize from AffymetrixGSE7030Phenotypic and molecular characterisation of a novel Bt2 allele in maize
7.397.8GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.397.4GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.197.4GSM320464protocol: Methylation filtration (MF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.282e-65248Zm.17694.1.S1_atCK370322--5e+0At3g2223060S ribosomal protein L27 (RPL27B)C.G.S.X.
0.326e-59226Zm.17158.1.A1_atCF636674--5e+0At5g01600ATFER1C.G.S.X.
0.323e-58224Zm.10433.1.S1_atBQ485781hypothetical protein LOC100277973-1e+0At5g10700aminoacyl-tRNA hydrolase/ protein tyrosine phosphataseC.G.S.X.
0.371e-54212Zm.17689.1.S1_atCK370194--3e+0At1g63055unknown proteinC.G.S.X.
0.306e-53206Zm.1631.1.S1_atBF728966--4e+0At3g2223060S ribosomal protein L27 (RPL27B)C.G.S.X.
0.322e-52204Zm.12207.1.S1_atBM379642--5e+0At5g14690unknown proteinC.G.S.X.
0.292e-49194Zm.11789.1.S1_atBM380783--3e-1At2g17320pantothenate kinase-relatedC.G.S.X.
0.331e-47188Zm.17158.2.A1_atBM267363--3e+0At5g47455unknown proteinC.G.S.X.
0.259e-46182Zm.4359.2.A1_atAI795776EMB2756-2e+0At5g52160protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.031e+034Arabidopsis thalianaAt1g62840842584unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P---C.G.S.X.
0.036e+032Glycine maxGmaAffx.71666.1.S1_atBE058823--8e-1At1g65845unknown proteinC.G.S.X.
0.039e-340Hordeum vulgareContig16536_atContig16536--5e+0At3g08690UBC11 (UBIQUITIN-CONJUGATING ENZYME 11)C.G.S.X.
0.062e-344Oryza sativaOs03g0694700AK109166.1-Conserved hypothetical protein5e+0At4g19270unknown proteinC.G.S.X.
0.046e+032Populus trichocarpaPtpAffx.75729.1.A1_atCV272660hypothetical protein-1e-13At3g48710-C.G.S.X.
0.073e-446Triticum aestivumTaAffx.58423.1.S1_atCA619755--1e+1At5g24310ABIL3 (ABL INTERACTOR-LIKE PROTEIN 3)C.G.S.X.
0.035e+030Vitis vinifera1617713_atCB837302--7e-1At1g71260ATWHY2 (A. THALIANA WHIRLY 2)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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