Gene omics information

Query gene ID Zm.9850.1.A1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7188.2Zm.9850.1.A1_atBM332622--2e+0At1g20880RNA recognition motif (RRM)-containing proteinS.X.H.G.
0.1710.6Zm.131.1.A1_atD83391.1siroheme uroporphyrinogen methyltransferase1-1e-3At5g40850UPM1 (UROPHORPHYRIN METHYLASE 1)S.X.H.G.
0.169.4Zm.3804.1.S1_atAW061673chalcone synthase G-3e-3At4g34850chalcone and stilbene synthase family proteinS.X.H.G.
0.158.6Zm.19052.1.A1_atBM331958--1e+0At1g29780NLI interacting factor (NIF) family proteinS.X.H.G.
0.147.7Zm.13354.1.S1_s_atAW067009indole-3-acetic acid-amido synthetase GH3.8-4e-12At2g14960GH3.1S.X.H.G.
0.094.0Zm.10832.1.A1_atBQ619413--5e+0At4g08190Ras-related GTP-binding protein, putativeS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
26.599.7GSM320462protocol: Methylation filtration (MF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
25.199.6GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
20.899.4GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
20.399.3GSM320457protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
17.299.1GSM320461protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
17.299.1GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
17.099.1GSM320456protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.998.9GSM320460protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.598.9GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.498.8GSM320459protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.012e-136Zm.13704.1.A1_atAY106627.1--2e-23At2g19490recA family proteinC.G.S.X.
0.053e+032Zm.9956.1.A1_atBM076038--1e+1At4g30993unknown proteinC.G.S.X.
0.023e+032Zm.3522.1.S1_atBG265505--1e-19At4g00740dehydration-responsive protein-relatedC.G.S.X.
0.023e+032Zm.16816.1.S1_a_atAY104056.1hypothetical protein LOC100216551-2e-25At3g54560HTA11C.G.S.X.
0.013e+032Zm.1574.1.S1_atAY106519.1--6e-20At2g24320unknown proteinC.G.S.X.
0.013e+032Zm.13254.1.A1_atAY496080.1tousled-like kinase 2-5e-50At5g20930TSL (TOUSLED)C.G.S.X.
0.031e+130ZmAffx.829.1.S1_atAI770531--3e+0At5g41390-C.G.S.X.
0.031e+130ZmAffx.829.1.A1_atAI770531--3e+0At5g41390-C.G.S.X.
0.031e+130ZmAffx.463.1.A1_atAI677335--3e+0At4g33450MYB69 (MYB DOMAIN PROTEIN 69)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.022e+034Arabidopsis thalianaAt1g20880838681RNA recognition motif (RRM)-containing proteinF:RNA binding, nucleotide binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;MPFOB---C.G.S.X.
0.032e+034Glycine maxGmaAffx.992.1.S1_atAW310932--5e+0Atmg00450-C.G.S.X.
0.021e+130Hordeum vulgareContig616_atContig616--4e+0At3g19160ATIPT8 (ATP/ADP ISOPENTENYLTRANSFERASES)C.G.S.X.
0.031e+132Oryza sativaOsAffx.6879.1.S1_at---0C.G.S.X.
0.022e+034Populus trichocarpaPtpAffx.203084.1.S1_atpmrna6102hypothetical protein-5e-1At4g23350unknown proteinC.G.S.X.
0.042e-344Triticum aestivumTa.28453.1.S1_atCF134083--4e-1At3g18035HON4C.G.S.X.
0.031e-136Vitis vinifera1618271_atCF201806.1--1e+0At5g48690-C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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